Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2426 ATGCCACGTGCCTCTGCTCTGCAACACTACATCCCTCTCTCTCTCTTCCTCACCGACCGTCTCTGTCTCAATTCTCAGTCTATATTAACAGCAGCGGCCGGTGGCGCCACCGTTAGTGCCAGTGGGCGGACAGAGACGATGAGCGATACACGGGTGGTCTTGGATGGCTTGAAGCCAACCATATTAATGGTTTTGGTGCAGATACTTTACGTTGGGATTAACGTGCTGTACAAGCTCGCCGTCATCGACGGCATGAGCTTGAAAGTGGTCATTGCCTATCGCTTTGTGTTCGCTTCTGCTTTCATGGCCCCTCTTGCTCTCTTCTTTGAAAGGAAGAAGCAGCCGAAGATGACTTGGACAATACTGTTTCAGGCACTCCTCTGCGGCTTATTTGGAGGGACACTGGCACAAACCTTGTACCTGGAGACGCTGGCCTTAGTATCGGCAACGTTTGCATCGGCAATGAACAATCTCATTCCAGCCATCACCTTCCTCTTGGCCCTCTTCTTCGATTTGGAAAAGTTGAATCTGAGAACAGCAATAGGGAAGGCCAAGGTCATTGGAACACTAACGGGAATTGGTGGAGCCATGCTTCTAACATTCTTCAAAGGTGCAGAAATAGACACAAGCTTCTTCCATGTCACCCTTTTGCCTCACCAAGACGGCCACGTGGCGTCTTCACACTCCTCCGTTGGCGGTAGTACCCTCTTGGGTGCACTGTGCGCATTGGGCAGTATCATCTCCCTCTCTATGTGGCTCATCGTTCAGAGTAAGATGAGTGAGAGATACCCATGTCATTACTCAAGCGCTACGTTGATGAACGTGATGGCATCGGTGTTTTCTATTGCGTTTGCTCTTTGCACTGAAAAGGATTGGAGTCAATGGAGATTGGGTTGGAATATTAGGCTTCTAACCGTATCCTATGCGGGATTAGTACCAGCTGGAATAAGTGTGGTAATCATTGCATGGTGTGTACGCATGAGAGGCCCTCTCTTTGTGTCTATTTTCAACCCTCTATTACTTTTGATGTTGGCTCTTCTTGGATCTTTCTTTATGGACGAGAAGCTACACCTTGGAAGTATAATTGGAGGCGTGTTGATAGTGTGTGGACTATACGTGGTTCTATGGGGCAAAGGCAAAGAGATGAAGAAGATGAATCGTTTAGTGCCATCACAGACGACCCTTGACGTGTCTCCTACAGTTGAAATTATTGTCAACAAATCTCTTGTAGATGATGACAAAAGTAACCACGACAACAATATTAATACTTCAAACCTTGTTAGGAATCATGAAGGTGCATCAGAATATGGAAATGAAGTAAAACATGATGACAATCAAAGGAAAGATGAAGTAGTATTAACAAATGTCTCAGAAAATTAG 1380 0.4609 MPRASALQHYIPLSLFLTDRLCLNSQSILTAAAGGATVSASGRTETMSDTRVVLDGLKPTILMVLVQILYVGINVLYKLAVIDGMSLKVVIAYRFVFASAFMAPLALFFERKKQPKMTWTILFQALLCGLFGGTLAQTLYLETLALVSATFASAMNNLIPAITFLLALFFDLEKLNLRTAIGKAKVIGTLTGIGGAMLLTFFKGAEIDTSFFHVTLLPHQDGHVASSHSSVGGSTLLGALCALGSIISLSMWLIVQSKMSERYPCHYSSATLMNVMASVFSIAFALCTEKDWSQWRLGWNIRLLTVSYAGLVPAGISVVIIAWCVRMRGPLFVSIFNPLLLLMLALLGSFFMDEKLHLGSIIGGVLIVCGLYVVLWGKGKEMKKMNRLVPSQTTLDVSPTVEIIVNKSLVDDDKSNHDNNINTSNLVRNHEGASEYGNEVKHDDNQRKDEVVLTNVSEN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2426 459 Pfam EamA-like transporter family 60 199 IPR000620 GO:0016020
Dere02g2426 459 Pfam EamA-like transporter family 237 375 IPR000620 GO:0016020
Dere02g2426 459 SUPERFAMILY Multidrug resistance efflux transporter EmrE 275 380 - -
Dere02g2426 459 PANTHER WAT1-RELATED PROTEIN 59 387 IPR030184 GO:0016020|GO:0022857
Dere02g2426 459 SUPERFAMILY Multidrug resistance efflux transporter EmrE 93 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2426 Dere-ChrDere02 25869937 25878397 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2426 57 385 Nodulin-like Gene Family AT1G68170 46.828 1.63e-95 290