Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2423 ATGGCAGATCATAAGCCAAGCCAAATCACTCCAGCTTCTCCCACTGAACCCCAAACCCCTTCAAAAACAAGCTCTCTCGGTCTCGACATAGAAGCACAAGAAGATCATCAACAAGAGATCGAGGTCGTTGACTACGCCAAAAGGGCTCAGTGGCTTCGAGCTGCCGTTCTCGGCGCAAACGACGGCTTGCTCTCGACAGCGTCTCTCATGATGGGCGTCGGCGCCGTCCGAAAGGACGTCAAGACGATGATTCTGACCGGGGTTGCTGGCTTGGTCGCTGGGGCTTGTAGTATGGCCATTGGAGAGTATGTCTCTGTGTACTCTCAGTATGATATTGAGTTAGCTCAGCTGAAGAGAGAAGGAAAAGAGATAAAGAAAGAGAAGTTGCCGAACCCGTTTCACGCAGCCGTGGCTTCAGCGCTCGCATTTGCGGCCGGCGCGGTGGTGCCGCTGCTCGGGGCGGCGTTTATAAAAGATTACAAGGTGAGGTTGGGGGTGGTAGTGGGTGTTGTGAGCCTTGCCTTGCTGGTCTTTGGAATTTTGGGTGCAGTTTTGGGGAAAGCTCCAATCGTGAAGTCATCTTTTAGGGTTTTGATCGGAGGGTGGCTAGCTATGGGAATCACTTTTGGCTTAACAAAGTGTGTGGATTTGGTTGGGGTTTGA 663 0.5219 MADHKPSQITPASPTEPQTPSKTSSLGLDIEAQEDHQQEIEVVDYAKRAQWLRAAVLGANDGLLSTASLMMGVGAVRKDVKTMILTGVAGLVAGACSMAIGEYVSVYSQYDIELAQLKREGKEIKKEKLPNPFHAAVASALAFAAGAVVPLLGAAFIKDYKVRLGVVVGVVSLALLVFGILGAVLGKAPIVKSSFRVLIGGWLAMGITFGLTKCVDLVGV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2423 220 Coils Coil 107 127 - -
Dere02g2423 220 MobiDBLite consensus disorder prediction 8 25 - -
Dere02g2423 220 Pfam VIT family 52 127 IPR008217 GO:0005384|GO:0030026
Dere02g2423 220 Pfam VIT family 126 212 IPR008217 GO:0005384|GO:0030026
Dere02g2423 220 MobiDBLite consensus disorder prediction 1 25 - -
Dere02g2423 220 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 32 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2423 Dere-ChrDere02 25763895 25764557 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2423 21 215 Nodulin-like Gene Family AT3G43660 70.408 2.61e-96 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2423 02 25763895 25764557 Dere02g2423 02 25763895 25764557 ECH