Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2417 ATGGCTTCTCTTGCAGGTCGTAACAATGAAATCTCACCAAACCACATTACGATCGAGATTCCCACCCATGCAAATGGAACAACAATAACAACGGAGCCAAACCCTAAGCCGAGCCAAGCCACCACCGAAGAAAGCCCTTGCGATAACATAGACTACTCTCAGAGGGCTCAATGGCTCCGCGCCGCCGTGCTGGGAGCCAACGACGGCTTGGTCTCCGTCGCCTCACTGATGATGGGCGTCGGAGCCGTGAAGGACGACGTAGCTGCCATGCTTCTGGCTGGGTTTGCAGGGTTGGTGGCCGGAGCTTGCAGTATGGCAATAGGAGAGTTTGTGTCAGTGTACACTCAGTATGACGTAGAGATGGCAAAAATCAAAAGAGAAATTATGAATGAAGAAGAAGGTGGTGATGAGGATGTGGAGGAGAAGATGGAGAAGCTGCCAAGCCCATGTCAGGCAGCACTAGCTTCAGCACTTGCATTTTCTGTGGGTGCTGTGTTGCCGTTGCTAGCAGCTGTGTTCATAAAGGACTACAGTATTAGGCTATGTGTGGTTGCTTCCGTGGCTAGCTTGGCTTTGCTTGTGTTTGGATATGTAGGAGCAGTGCTTGGAAACACTCCTGTGAGGAGTTCCTGCGTTAGAGTCCTCATTGGAGGTTGGATTGCCATGGCTATTACTTTTGGACTCACCAAGTTGCTTGGAGCCACTGGACTATGA 714 0.5084 MASLAGRNNEISPNHITIEIPTHANGTTITTEPNPKPSQATTEESPCDNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKDDVAAMLLAGFAGLVAGACSMAIGEFVSVYTQYDVEMAKIKREIMNEEEGGDEDVEEKMEKLPSPCQAALASALAFSVGAVLPLLAAVFIKDYSIRLCVVASVASLALLVFGYVGAVLGNTPVRSSCVRVLIGGWIAMAITFGLTKLLGATGL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2417 237 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 38 232 IPR008217 GO:0005384|GO:0030026
Dere02g2417 237 MobiDBLite consensus disorder prediction 15 47 - -
Dere02g2417 237 Pfam VIT family 59 138 IPR008217 GO:0005384|GO:0030026
Dere02g2417 237 Pfam VIT family 127 229 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2417 Dere-ChrDere02 25629132 25629845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2417 32 237 Nodulin-like Gene Family AT3G43660 64.078 8.59e-91 264