Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2411 ATGGGAGATAGCAATGTCAACCTTCCACCTGGGTTCAGATTCTATCCCACAGACGAAGAGCTAGTGGTCCATTTCCTTCACAGAAAGGCTTCTCTTTTACCATGCCACCCTGATGTCATCCCTGACCTCGAGCTCTATCCCTACGATCCATGGGAGCTCGATGGAAAAGCTCTGGGTGAGGGAAATCAATGGTACTACTATAGCAGAAGGATACAGAACAGGATTACAGGGAGTGGGTATTGGAAAGCGATGGGAATGGAAGAGGCAGTAATTGCAGGAAGCAATAATACGAGAGTTGGAATGAAGAAATACTTTGTGTTCCATGTGGGAGAAGCACCTTCTGGCATCAAAACCGACTGGGTAATGCAAGAATATTGCCTCTCAGATTCTTCTGCTTCCTCTAGCAGATCATCATCCTCCTCCTCTAGAAGAAAATCACAACCAAAACCAGATTACAGCAAATGGGTGATTTGTCGAGTATATGAACGCAACGATGACGATGGTGATGGTGGCGGTGGTGGTGATAATGGAACAGAGCTGTCTTGTTTGGATGAAGTGTTCTTGTCATTGGATGATCTTGAAGAAATAAGCTTGCCAAATTAG 603 0.4511 MGDSNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLELYPYDPWELDGKALGEGNQWYYYSRRIQNRITGSGYWKAMGMEEAVIAGSNNTRVGMKKYFVFHVGEAPSGIKTDWVMQEYCLSDSSASSSRSSSSSSRRKSQPKPDYSKWVICRVYERNDDDGDGGGGGDNGTELSCLDEVFLSLDDLEEISLPN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2411 200 SUPERFAMILY NAC domain 6 162 IPR036093 GO:0003677|GO:0006355
Dere02g2411 200 Gene3D NAC domain 17 167 IPR036093 GO:0003677|GO:0006355
Dere02g2411 200 PANTHER NAC TRANSCRIPTION FACTOR 56 8 168 - -
Dere02g2411 200 MobiDBLite consensus disorder prediction 130 151 - -
Dere02g2411 200 MobiDBLite consensus disorder prediction 130 146 - -
Dere02g2411 200 ProSiteProfiles NAC domain profile. 8 163 IPR003441 GO:0003677|GO:0006355
Dere02g2411 200 FunFam NAC domain-containing protein 104 17 166 - -
Dere02g2411 200 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2411 Dere-ChrDere02 25503271 25504040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2411 1 164 NAC Transcription Factor Family AT1G61110 43.258 8.94e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere02g2411 NAM 1.8e-29 No_clan