Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2405 ATGAGTTGCCGTGTTAGCAACGAGCTTGCAGTAGCAACGGCAATGGAGGAAATAAGAAGAAGTAGTTCTTCAGGTCGCCAAAACAAGGGAGATCATAGTTTGCCATATATTCACAAGGTGGGAGCTCCTCCAAAGCAGAAGCTTGTGAAAGAGATCAAAGATGCTGTGAGGGAGACTTTCTTCTCAGACAACCCCCTAGGCCATTTCAAGGACCAGCCAGGATCAAAGAAGCTTGTTCTCGGTCTTCAAGCAGTGTTTCCAATCACTGAATGGGGAAGAGATTACAGTTTTGGTAAATTCAAAGGTGATTTCGTTTCTGGACTCACCATTGCAAGTCTCTGTATTCCTCAGGATATTGCATATGCAAAGCTTGCAAATTTGGATCCCCAATATGGTCTATACACTAGCTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGGAGCTCAAGAGATATTGCCATAGGACCAGTTGCTGTGGTGTCGCTCCTGCTTGGAAGCATGCTCACAAATGAGATTAGTGACTATAAGAATCATGACTATCTTCGTCTTGCTTTCACAGCTACCTTCTTTGCAGGAATTACTCAAATGGCACTAGGTGTTTTCAGACTTGGTTTCTTGATTGATTTCCTATCTCATGCTGCCATAGTGGGGTTTATGGCTGGGGCAGCCATTACTATTGCCCTACAACAACTTAAAGGGCTACTTGGCATAACCAATTTCACCAAGAAGACTGATATTGTTTCTGTCATGCGCTCAGTTTGGAGTTCAGCACACCATGAGTGGAACTGGCAGACTATAGTCTTAGGAGTATCATTTTTGGCCTTCCTTCTTGCATCCAAGCATATGGCTAAAAAGAACAGGAAATTCTTCTGGTTGTCTGCAATTGCTCCCTTGACCTCTGTTGTACTCTCTACCATCTTTGTGTTCATTACTCGAGCCGACAAAAAAGGCATTTCAATAGTGAAGCATATAGAAAGGGGTGTAAACCCAGCATCAGCTAATGAAATATTCTTCAGTGGAAAGTATCTTGGTCCTGGTATTCGGATTGGTGTGGTATCTGGTATGATAGCACTCACGGAAGCCATAGCAATTGGGAGAACTTTTGCTGCCATGAAAGACTATTCACTTGATGGTAACAAAGAAATGGTGGCCATGGGAACAATGAATGTTATTGGTTCTCTCACTTCTTGTTATGTAGCTACAGGATCATTTTCTCGCTCAGCAGTGAACTACATGGCTGGCTGTACTACTGCTGTATCAAACATAGTTATGTCCATTGTTGTGTTACTAACTCTGGAACTCATTACACCCCTGTTCCATTACACACCAAATGCTGTGCTTTCTTCCATTATAATTGCTGCTGTAGTAGGCCTTGTGGACATAGAAGCTGCTGTTCTGCTTTGGAAGATTGACAAATTTGACTTTGTAGCCTGCATGGGAGCCTTCTTCGGTGTCATCTTCAAAAATGTTGAGATTGGCCTTCTTATTGCGGTGGTAATATCTTTTGCCAAGATCCTTTTACAAGTAACAAGGCCAAGGACAGCAGTACTTGGGAGGGTTCCAGGAACTTCTGTTTACAGGAACATCCTACAATACCCAAAAGCTATACAGGTTCCTGGCATGTTCATTATCAGAGTTGACTCTGCAATCTACTTCTCAAACTCCAATTACGTCAAAGAGAGAATTATGAGATGGTTGGCTGATGAAGATGCACAGAAGAAAGAAAACAACTTACCCAGAACAGAATATCTTATTGTTGAAATGTCACCTGTGACTGACATTGACACTAGTGGTATCCATGCCTTTGAAGAGTTATACAAAAGCCTTCAGAAAAGAGAGATCCAACTTGTGTTGGCAAACCCTGGGCCAATAGTAATGGGGAAGCTTCATGCATCAAAGTTCACAAATTTAATTGGGGAAGACAAGATTTTCCTTACAGTGGCGGATGCTGTCGCCACCTTTGGTTCAAAGACTGAAGAACCTTGA 1986 0.4255 MSCRVSNELAVATAMEEIRRSSSSGRQNKGDHSLPYIHKVGAPPKQKLVKEIKDAVRETFFSDNPLGHFKDQPGSKKLVLGLQAVFPITEWGRDYSFGKFKGDFVSGLTIASLCIPQDIAYAKLANLDPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGSMLTNEISDYKNHDYLRLAFTATFFAGITQMALGVFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGITNFTKKTDIVSVMRSVWSSAHHEWNWQTIVLGVSFLAFLLASKHMAKKNRKFFWLSAIAPLTSVVLSTIFVFITRADKKGISIVKHIERGVNPASANEIFFSGKYLGPGIRIGVVSGMIALTEAIAIGRTFAAMKDYSLDGNKEMVAMGTMNVIGSLTSCYVATGSFSRSAVNYMAGCTTAVSNIVMSIVVLLTLELITPLFHYTPNAVLSSIIIAAVVGLVDIEAAVLLWKIDKFDFVACMGAFFGVIFKNVEIGLLIAVVISFAKILLQVTRPRTAVLGRVPGTSVYRNILQYPKAIQVPGMFIIRVDSAIYFSNSNYVKERIMRWLADEDAQKKENNLPRTEYLIVEMSPVTDIDTSGIHAFEELYKSLQKREIQLVLANPGPIVMGKLHASKFTNLIGEDKIFLTVADAVATFGSKTEEP 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2405 661 Pfam Sulfate permease family 100 479 IPR011547 GO:0016020
Dere02g2405 661 MobiDBLite consensus disorder prediction 17 36 - -
Dere02g2405 661 SUPERFAMILY SpoIIaa-like 533 655 IPR036513 -
Dere02g2405 661 PANTHER SULFATE TRANSPORTER 49 653 IPR001902 GO:0016020|GO:0055085
Dere02g2405 661 Gene3D STAS domain 511 657 IPR036513 -
Dere02g2405 661 ProSiteProfiles STAS domain profile. 531 654 IPR002645 -
Dere02g2405 661 FunFam Sulfate transporter 31 511 657 - -
Dere02g2405 661 NCBIfam sulfate permease 87 650 IPR001902 GO:0016020|GO:0055085
Dere02g2405 661 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Dere02g2405 661 CDD STAS_SulP_like_sulfate_transporter 532 647 - -
Dere02g2405 661 Pfam STAS domain 532 650 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2405 Dere-ChrDere02 25323911 25328788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2405 26 660 Inorganic Solute Cotransporters AT1G22150 71.226 0.0 910
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2405 02 25323911 25328788 Dere02g2405 02 25323911 25328788 ECH