Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2404 ATGAATCTTTCATCCTTAACCTCATTATCATCACCATCATCATCAATCCTAACCCTTAATCCCAAGCCATCTCACTCTCTTCATCTTCCACTCTCAAATAAACAGAAACAGCCATCATTAAGGCCCATGAGAGTTTCTGCAATTTCATGTTCAACCACCAGGACCACCACCGTCATCAATGGCAGTAATAACAGCAACTTATACAAGATTCTCTCTCTGAGCTCTGAGAGTGCAACCATGGCTGAGATCAAGCAAGCTTACCGGTCGATGGCGCTCCGGTACCACCCCGACGTGTGCCGTGACACGTCGGCGAAGGAGGAGTGGACGAGGATGTTCGTGCAGCTGAATGCTGCCTACGAGACGCTCTCGGATCCCCAGCTTCGTGAAGAGTACGATTGCAGAGTACTGGGTTTGAGGAAGAGGATGAGTGGTGGGAGTGACATTGAGGGGTTGAGGAAGACGACGGAGAGGTGGGAGGAGCAGGTTGTGGAGTTGAAGAGAAGGTCTAACAGAAGAATGGGACGCTCATGGGGGAGTTCTGTGAGAGCTCAAAGAATGAAAAACCGTGACTGA 573 0.4974 MNLSSLTSLSSPSSSILTLNPKPSHSLHLPLSNKQKQPSLRPMRVSAISCSTTRTTTVINGSNNSNLYKILSLSSESATMAEIKQAYRSMALRYHPDVCRDTSAKEEWTRMFVQLNAAYETLSDPQLREEYDCRVLGLRKRMSGGSDIEGLRKTTERWEEQVVELKRRSNRRMGRSWGSSVRAQRMKNRD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2404 190 ProSiteProfiles dnaJ domain profile. 66 135 IPR001623 -
Dere02g2404 190 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Dere02g2404 190 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Dere02g2404 190 MobiDBLite consensus disorder prediction 1 20 - -
Dere02g2404 190 PRINTS DnaJ domain signature 87 102 IPR001623 -
Dere02g2404 190 PRINTS DnaJ domain signature 107 127 IPR001623 -
Dere02g2404 190 PRINTS DnaJ domain signature 69 87 IPR001623 -
Dere02g2404 190 CDD DnaJ 66 124 IPR001623 -
Dere02g2404 190 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 25 188 - -
Dere02g2404 190 SMART dnaj_3 65 127 IPR001623 -
Dere02g2404 190 Coils Coil 148 168 - -
Dere02g2404 190 Pfam DnaJ domain 66 132 IPR001623 -
Dere02g2404 190 Gene3D DnaJ domain 54 161 IPR036869 -
Dere02g2404 190 MobiDBLite consensus disorder prediction 169 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2404 Dere-ChrDere02 25314132 25314704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2404 68 132 C2H2 Transcription Factor Family AT1G74250 41.791 4.53e-07 47.4