Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2402 ATGACTGGGCTGCATTTTCATGCAGTTGGACTTGTTGTAGATGATAATCATGCAATCTCCTATGGTCTCATGGCCAAGAGATCTAAGAGACCCAAAACAAGCTGCCTCAGTTTTCTCTCTCGTTTTCCCGAGAAAGTTTACAGAAAGAAAGAGCAAAGAAGAGAGGAAATGGCAGGTGCTGCAACATCTGGTGCTGTGTTGAATGGGTTAGGATCTTTCTTCTTGTGTGGAGGAAAGAGGAGCCACTTCCTTTTGGGTGCAAAAGCCAGTGGTGCTGCTGTTAGTCCCAAGAGGTTCATTGCGGCTGCTGCTGCTGCTCAACCTAAGAAGTCTTGGATCCCTGGCGTTAAAGCAGGTGGAAACTTCATCGACCCTGAATGGCTCGATGGCTCGCTACCAGGAGACTATGGCTTCGACCCTCTTGGCCTAGGGAGGGACCCAGCATTCCTCAAATGGTACAGAGAAGCAGAGCTCATCCATGGCCGGTGGGCTATGGCTGCAGTCGTCGGCATCTTCGTCGGCCAGGCTTGGAGTGGTGTTCCTTGGTTCGAGGCTGGAGCTCAGCCTGGAGCCATTGCTCCTTTCTCCTTCGGCTCACTTCTGGGCACCCAGTTGCTCCTCATGGGGTGGGTAGAGAGCAAGAGGTGGGTGGACTTCTTCAACCCTGATTCACAGTCTGTGGACTGGGCTACGCCGTGGTCAAGGACGGCGGAGAACTTCGCCAATGCCACCGGTGACCAGGGCTACCCCGGCGGCAAGTTCTTTGACCCATTGGGATTTGCAGGCACAATCAAGGATGGGGTTTACATTCCAGACAGGGAGAAGCTGGAAAGACTGAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTGATCTTCTACTTTGAAGCTGGACAAGGAAAGACACCTCTTGGTGCTCTTGGCTTGTAA 942 0.5212 MTGLHFHAVGLVVDDNHAISYGLMAKRSKRPKTSCLSFLSRFPEKVYRKKEQRREEMAGAATSGAVLNGLGSFFLCGGKRSHFLLGAKASGAAVSPKRFIAAAAAAQPKKSWIPGVKAGGNFIDPEWLDGSLPGDYGFDPLGLGRDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGAQPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVDWATPWSRTAENFANATGDQGYPGGKFFDPLGFAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2402 313 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 108 311 IPR001344 GO:0009765|GO:0016020
Dere02g2402 313 Pfam Chlorophyll A-B binding protein 125 301 IPR022796 -
Dere02g2402 313 SUPERFAMILY Chlorophyll a-b binding protein 125 313 - -
Dere02g2402 313 Gene3D Chlorophyll a/b binding protein domain 125 311 - -
Dere02g2402 313 FunFam Chlorophyll a-b binding protein, chloroplastic 125 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2402 Dere-ChrDere02 25235670 25238449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2402 61 313 Chloroplast and Mitochondria Gene Families AT1G15820 83.137 3.09e-151 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2402 02 25235670 25238449 Dere02g2402 02 25235670 25238449 CCT
Dere02g2402 02 25235670 25238449 Dere02g2402 02 25235670 25238449 ECH