Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2385 ATGGCGGAGCGTGGTTCTTACGGATTGGGTCCTCGATTGGATATTCAACAATTACAATTTGAAGCCCAGCATCGTTGGTTGCGGCCTGCTGAAATTTGTGAAATTCTCCATAATTATCAGATGTTTCATATCACATCAGAACCTCCACACAGGCCACCAAGTGGTTCACTTTTTCTTTTTGACCGCAAGGTGTTAAGATATTTCAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGGAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGCATCGATGTATTACATTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACAGGATATGATGCACATTGTTTTTGTCCACTACTTGGAAGTAAAGAGTAACAAGACAAATATAGGAGGAAAATCAGATATTGTTGAAGTTTCATCAGATTCCCTCAAGGGCAGCTCTGCATCAACTGGTTTTCCAGCAAATTATGTTACTGTGCCTTCAACAAGCACAGATTCCATGAGCCCAACTAGCACTTTGACATCCTTATGTGAGGATGCTGATTCTGAGGATATTCATCAAGCAAGTTCTGGGTTACGTTCATTTCATGATTCACCTAGTATGAGAAATGGTCTTCCAACGGACAAGAGTGATGCTGGTTTGAATAGTCCGTATCTTCTGCATCCCTTTTCAGGTGATCATGGACAGTCATCAGTTTCTGGAACCGAACATATTTCACTTGCTCAGAGAGATAAATCTAGAGGATATGATACTAGTACTTCTTTCTCTGAGGGTCAAAAAGCAAACGGAATGACATTATGGGACAATGTTTTTGAACAATGTATAAATGGATTGCCTACTGATCTTTCTCTAGTATCATTTCCTTCCATCCCATCCAGTTCAATAGAAAACATTCTTGAACAAGAACATACTGTACTGGGCAACCTTTTAGCCAGCAAGCAGTCAAATTGGCAGATTCCTTTGGAAAGTAGTCCACGACAGTTGCTTAAAGGATCCACTACCCAGTTATTGGGTTTGGAATCTGGATCTGGCTTTAGCAATGGTTTGCTGGAACATGAAACAAATAATACGAGTCCTGACATTGCTCCTGGCGTGTTCACTTTTGATGGTCAGCCAAAAGAGGAGCCTATGCTGGAAAACTTTCCGAAACAACATACAGGGACACAATCTCAAATTTTGGTGAAATCCAATTTTGAGAATGAAGTTCCTACTGAAGAAAGTATCACTCATGGCTCCACTTTGAGGCATAACTTACTAGATGGGGGGGAGAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATTACTAGAGAACTTGAAGAGGTGGAGGATCTTCGTCTGCAGTCATCATCTGGAATTTCTTGGAGCACAGACGAATGTGGGCATGTGATAGACGATTCCTCATTGAGCCCCTCCCTCTCTCAGGACCAGCTGTTTAGCATATATGATTTTTCACCTAACTGGGCTTATGCTGAATCAGAAACTGAGGTTTTGATTATTGGAACGTTTTTGAAGAGTGAATCAGAGGTAGCAAATTGTAACTGGTCGTGCATGTTTGGGGAAGTGGAGGTTCCTGCTCAGGTTCTAGCTAGTGGAATTCTGTGCTGTCCGGCTCCACCTCACAAGGCTGGACGGGTCCCCTTCTATGTAACCTGCTCCAACAGGTTGGCTTGCAGTGAAGTGCGGGAGTTTGATTACACAGAGGGCTTTGCTGAAATTGTAGATATTTCAGATTTCTTTAACAGTTCTACTGAAATGCGGCTTCTTCTGAGACTGGAGAAGTTACTTTCTTCAAAATCAGCACATCCGTCAAATCACACCTTGGATGGTAATGTGGTAAAAAGAAACTTGATGTTTAAGCTTATTTCACTGAAGGAGGAAAAGGAATTCTCAAACAAGGAAGAGCACACGTTAGAGAAAGACGCATCCCAACACAAAATGAAGGAACAAATATTTCACAGGCAAGTTAAAGAGAAGCTGTACTCATGGCTACTTCACAAAGTAATTGAAGATGGTAAAGGGCCAAATGTACTAGACAAGGAGGGGCAGGGTGTGCTGCATTTAGCAGCTGCTCTTGGTTGTGATTGGGCAATAATGCCAATTATAACTGCCGGAGTAAATATCAATTTTCGGGACATGAATGGGTGGACGGCTCTGCATTGGGCTGCATCCTGTGGCAGAGAACGGACAGTTGCTGTTCTTGTCTCCATGGGTGCTGCTCCTGGAGCATTGACAGATCCATCTCCAACGTTTCCTTCTGGTAGAACACCTGCAGATCTTGCTTCAAGCAACGGACACAAAGGAATCTCTGGTTTTCTTGCAGAGTCTTCATTAACTAGTCACCTCTCATCCCTCACAATGAATGATCTGAAGGAAGATGGTGAGCGAAGAGCTTCAGAAGTAGAAGCAGTGCTGACAGTTTCAAAACGAACTGCAACACCAGGATTTTGTGGTGATATGCCAGATGCCCTCTGCCTTAAAGATTCTCTTACTGCCCTTCGTAATGCTACGCAAGCGGCTGATCGTATATATCAAGTATTTAGAATGCAGTCATTTCAGAGAAAGCAGATGACTCAGTTCGACGATGATGAATTTGGATTGTCAGATCAGCAAGCTCTTTCTCTTATAGCTTCTAAGGCATGCAAGGCTGGACAAGGAGATGATTTAGCTTATACGGCTGCAGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTCCTTATAATTCGTCAAAGAGTTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGAAGTATAAATCAGTCATCTGGTCTGTAGGAATTTTGGAGAAGGTAATATTACGATGGAGGCGCAAGGGCAGTGGTTTACGTGGCTTCCGACCAGATACAAATAAGATCCCCAACCAGCAACATGATAATTTGAAAGAGGATGATTACGATTATCTCAAGGAAGGAAGGAAACAAAGTGAAGAAAGGTTCCAAAAGGCACTTCTGAGGGTAAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGGCGTCTGCTAAATGTTGTAGAGGACTTCCGTCAAACCAAGGCATGCAGTATGGACGTAGTCAATTCAGAAGAGACAGTTGATGGCGTGGGGGACCTTATTGATATTGACATGCTTTTAGATGATGACAAATTCATTCCTATAGCATTCGAATGA 3237 0.4254 MAERGSYGLGPRLDIQQLQFEAQHRWLRPAEICEILHNYQMFHITSEPPHRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKSNKTNIGGKSDIVEVSSDSLKGSSASTGFPANYVTVPSTSTDSMSPTSTLTSLCEDADSEDIHQASSGLRSFHDSPSMRNGLPTDKSDAGLNSPYLLHPFSGDHGQSSVSGTEHISLAQRDKSRGYDTSTSFSEGQKANGMTLWDNVFEQCINGLPTDLSLVSFPSIPSSSIENILEQEHTVLGNLLASKQSNWQIPLESSPRQLLKGSTTQLLGLESGSGFSNGLLEHETNNTSPDIAPGVFTFDGQPKEEPMLENFPKQHTGTQSQILVKSNFENEVPTEESITHGSTLRHNLLDGGESLKKVDSFSRWITRELEEVEDLRLQSSSGISWSTDECGHVIDDSSLSPSLSQDQLFSIYDFSPNWAYAESETEVLIIGTFLKSESEVANCNWSCMFGEVEVPAQVLASGILCCPAPPHKAGRVPFYVTCSNRLACSEVREFDYTEGFAEIVDISDFFNSSTEMRLLLRLEKLLSSKSAHPSNHTLDGNVVKRNLMFKLISLKEEKEFSNKEEHTLEKDASQHKMKEQIFHRQVKEKLYSWLLHKVIEDGKGPNVLDKEGQGVLHLAAALGCDWAIMPIITAGVNINFRDMNGWTALHWAASCGRERTVAVLVSMGAAPGALTDPSPTFPSGRTPADLASSNGHKGISGFLAESSLTSHLSSLTMNDLKEDGERRASEVEAVLTVSKRTATPGFCGDMPDALCLKDSLTALRNATQAADRIYQVFRMQSFQRKQMTQFDDDEFGLSDQQALSLIASKACKAGQGDDLAYTAAVQIQKKFRGWKKRKEFLIIRQRVVKIQAHVRGHQVRKKYKSVIWSVGILEKVILRWRRKGSGLRGFRPDTNKIPNQQHDNLKEDDYDYLKEGRKQSEERFQKALLRVKSMVQYPEARAQYRRLLNVVEDFRQTKACSMDVVNSEETVDGVGDLIDIDMLLDDDKFIPIAFE 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2385 1078 ProSiteProfiles IQ motif profile. 903 932 IPR000048 GO:0005515
Dere02g2385 1078 ProSiteProfiles IQ motif profile. 926 950 IPR000048 GO:0005515
Dere02g2385 1078 Gene3D - 903 949 - -
Dere02g2385 1078 SMART iq_5 925 947 IPR000048 GO:0005515
Dere02g2385 1078 SMART iq_5 902 924 IPR000048 GO:0005515
Dere02g2385 1078 FunFam Calmodulin-binding transcription activator 2 903 950 - -
Dere02g2385 1078 SMART ANK_2a 727 756 IPR002110 GO:0005515
Dere02g2385 1078 SMART ANK_2a 766 795 IPR002110 GO:0005515
Dere02g2385 1078 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1040 - -
Dere02g2385 1078 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Dere02g2385 1078 Pfam IPT/TIG domain 494 572 IPR002909 -
Dere02g2385 1078 ProSiteProfiles Ankyrin repeat region circular profile. 727 752 - -
Dere02g2385 1078 MobiDBLite consensus disorder prediction 200 218 - -
Dere02g2385 1078 ProSiteProfiles Ankyrin repeat profile. 727 759 IPR002110 GO:0005515
Dere02g2385 1078 Gene3D - 632 783 IPR036770 -
Dere02g2385 1078 Pfam Ankyrin repeats (3 copies) 699 789 IPR002110 GO:0005515
Dere02g2385 1078 MobiDBLite consensus disorder prediction 200 246 - -
Dere02g2385 1078 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Dere02g2385 1078 SUPERFAMILY Ankyrin repeat 678 788 IPR036770 -
Dere02g2385 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 900 952 IPR027417 -
Dere02g2385 1078 SUPERFAMILY E set domains 494 579 IPR014756 -
Dere02g2385 1078 SMART CG_1_2 18 136 IPR005559 GO:0003677
Dere02g2385 1078 Gene3D Immunoglobulins 487 582 IPR013783 -
Dere02g2385 1078 FunFam Calmodulin-binding transcription activator 2 487 583 - -
Dere02g2385 1078 Pfam IQ calmodulin-binding motif 928 947 IPR000048 GO:0005515
Dere02g2385 1078 Pfam IQ calmodulin-binding motif 906 923 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2385 Dere-ChrDere02 24894852 24916178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2385 1 1055 CAMTA Transcription Factor Family AT5G64220 53.197 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dere02g2385 CG-1 3.5e-51 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2385 02 24894852 24916178 Dere02g2385 02 24894852 24916178 CCT