Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2383 ATGGATTCTGCGCAAATGGCGCTTTTCAAAGCTCTGAACCGCCATTTCGGCAGACCTCCTTTGAGTCCATGCATACCCACGGTTCTTCTTCATCGCAGGCTTAAATGTGTTTCTTATAACTATGCCATTTACAAGTCCAGCTCGTTTGCTTCTTCGCCCTCGCTCAGGAACTTTTGTGCGGCGGTCACCCGACTGCCCTGTCGTTTCCAGTGCGTTTCGAGCTCCGCTGCTCCGTTTGCTTCTTCTGGCGCGGGAAATGGCGGGCTTGGAGGGGAGAGTGGGGGTGGTGCCGGTGGCGGAGACGGTGGCAACGGCGGGCCGGGTGGTGATTTTGGTGATGGCAATCCCAAATTGGTTGGCGAAGGAATTAAAGAACATCTGACACTTTCGTCTGATGTTATAATTCTCGATGTTGGGGGAATGGTGTGCGGGGGGTGTGCAGCTAATGTGAAAAGAATTCTAGAAAGTCGACCTCAAGTGTCAACTGCTACTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTGTCTGAAGCAAAAACAGTACCAAATTGGCAAAAGCAATTAGGAGAGGCACTTGCAGAGCATTTGACTAGCTTTGGTTTCAAGTCTAGCCTTCGAGTGGCAGGTCAGGAAATAACAACTGACGGAGTTATTTCACCATATTAA 672 0.4955 MDSAQMALFKALNRHFGRPPLSPCIPTVLLHRRLKCVSYNYAIYKSSSFASSPSLRNFCAAVTRLPCRFQCVSSSAAPFASSGAGNGGLGGESGGGAGGGDGGNGGPGGDFGDGNPKLVGEGIKEHLTLSSDVIILDVGGMVCGGCAANVKRILESRPQVSTATVNLTTETAIVWPVSEAKTVPNWQKQLGEALAEHLTSFGFKSSLRVAGQEITTDGVISPY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2383 223 CDD HMA 136 191 IPR006121 GO:0046872
Dere02g2383 223 ProSitePatterns Heavy-metal-associated domain. 138 167 IPR017969 GO:0046872
Dere02g2383 223 ProSiteProfiles Heavy-metal-associated domain profile. 132 199 IPR006121 GO:0046872
Dere02g2383 223 FunFam Copper-transporting ATPase PAA1, chloroplastic 132 207 - -
Dere02g2383 223 Pfam Heavy-metal-associated domain 136 195 IPR006121 GO:0046872
Dere02g2383 223 MobiDBLite consensus disorder prediction 90 117 - -
Dere02g2383 223 SUPERFAMILY HMA, heavy metal-associated domain 134 182 IPR036163 GO:0046872
Dere02g2383 223 Gene3D - 133 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2383 Dere-ChrDere02 24853644 24857699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2383 130 210 Primary Pumps ATPases AT4G33520 74.074 3.01e-38 131