Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2382 ATGGGAATTTCCAGTTGGGTACCTGCTGCCCAGTTAATGCTGTATACAGTTGATTCAACAAGAGATAGTTTCCTCTGCATTTTTGAAAGGAAAATGGAAGAAAAACGTAGACAGTTGAAAGAAAGTGGTCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCCGTCTGCCTTGTTGGCCATCTCTCTCATTTCCTTGGAGCTAAGGCAACATGGACCCATGCATTTCATTCCACTGGGTTTCATCTATCTCTGTCTCTGTTTACATTGGTTGGTCCAGGGCGCCAACTTATTCTTGATGGCATAAAAAGCCTTGTAAAAGGGGCACCAAACATGAACACCTTAGTTGGTCTTGGGGCTCTGTCATCATTTACTGTCAGTTCATTCGCTGCTTTGCTGCCAAAATTGGGCTGGAAGGCTTTCTTTGAAGAACCAATTATGCTAATTGCATTTGTCTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTCTCAGTATATTGCCATCAAAAGCTCGTCTTCTGGTTAGCAATGATAATACAGAGTTTGGCTCTAGTGTTGAAGTTCCTTCTGACAGCCTTTCTATTGGAGACCGAATTCTTGTGCTACCTGGAGATCGTATCCCTGCAGATGGAATTGTCAGAGCTGGTAGAAGCACTGTAGACGAATCAAGTTTTACTGGAGAATCGCTGCCGGCAACAAAATTATCTGGGAGTCAGGTTGCAGCTGGAAGTATAAATCTTAATGGTACTCTGACGATTGAAGTGCAGAGATCAGGTAGTGAGACTGCTATGGGAGACATTCTTCGTCTGGTTGAAGAAGCACAGAGTAGGGAAGCTCCGGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTGGGGAGTAATGGCAATTTCTGCAGCCACATTTACATTCTGGAGTTTGTTTGGCACTCACATTCTACCTGCTACTCTATATCAAGGAAGTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGATTGGCCACACCTACAGCTGTGCTGGTTGGAACTTCTTTGGGAGCTACAAGAGGATTACTTCTACGTGGTGGAAACATTCTAGAGAAGTTTTCAATGGTAAATGCCGTTGTGTTTGACAAAACTGGGACCCTCACAATTGGTAGACCTGTTGTGACAAAGATTGTCACTACAAATGGACAAGACAAAAATTCAAGGCAAACTGCAGACAATGCCTGGTCGGATGTTGAAGTTCTGAGGTTAGCTGCTGGAGTTGAATCAAATACGGTACACCCAGTTGGGAAAGCAATTGTGAAAGCTGCTCAGGCAGTTAATTGTCATAATGCAAAGGTAGCAGATGGAACATTTTTGGAAGAACCTGGATCTGGTGCAGTAGCAACCATTGATGACAATAAGGTTTCTGTTGGGACTTTGGAATGGGTCACTAGGCAGGGTGCAGACAAAAATATTCATCAAGAAGTCGAGGAGTATAGAAATCAGTCTGTTGTCTATGTTGGAGTTAATGATACTGTAGCTGGCCTTATATATTTTGAGGATCAGATAAGGGAAGATGCAAGAAATGTTGTTGCAGCATTGTCTAAGCAAGGAATTGGTGTGTATATGCTCTCTGGGGACAAAAGGAGTACAGCTGAGTATGTTGCATCTGTTGTTGGAATTCCAAGAGAGAAGGTGCTATCTGGAGTGAAACCAGATGAAAAAAAGAAGTTTGTAAATGAACTCCAGAAAGATCAGAAAGTTGTTGCTATGGTTGGTGATGGGATCAATGATGCAGCTGCCTTGGCTTCTTCACATATTGGTATTGCATTAGGTGGAGGTGTTGGAGCTGCTAGTGAGGTGTCTTCTATTGTACTGATGGGCAACAGGCTCTCACAGTTGCTTGATGCGTTGGACCTTAGCAGGCTAACTATGAAGACCGTGAATCAAAATCTTGGCTGGGCTTTCCTATACAACATTGTTGGAATTCCAATTGCAGCTGGATTGTTATTTCCAGTAAATGGGACCATGCTGACTCCATCAATTGCAGGGGCTCTAATGGGGTTGAGTTCCATTGGGGTAATGACAAACTCGTTACTTCTGAGATTCAGATTTTCCAGAAAGCGAAAACAAATCCATGTGGTATCCCAGAAGATTGAAACCCATGTAGATAGTGATCTTGTAGACCGAAAAGGGAAATTGAAGTATGGTCAGTAG 2250 0.4329 MGISSWVPAAQLMLYTVDSTRDSFLCIFERKMEEKRRQLKESGRELAVSWALCAVCLVGHLSHFLGAKATWTHAFHSTGFHLSLSLFTLVGPGRQLILDGIKSLVKGAPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDNTEFGSSVEVPSDSLSIGDRILVLPGDRIPADGIVRAGRSTVDESSFTGESLPATKLSGSQVAAGSINLNGTLTIEVQRSGSETAMGDILRLVEEAQSREAPVQRLADKVAGHFTWGVMAISAATFTFWSLFGTHILPATLYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVNAVVFDKTGTLTIGRPVVTKIVTTNGQDKNSRQTADNAWSDVEVLRLAAGVESNTVHPVGKAIVKAAQAVNCHNAKVADGTFLEEPGSGAVATIDDNKVSVGTLEWVTRQGADKNIHQEVEEYRNQSVVYVGVNDTVAGLIYFEDQIREDARNVVAALSKQGIGVYMLSGDKRSTAEYVASVVGIPREKVLSGVKPDEKKKFVNELQKDQKVVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMGNRLSQLLDALDLSRLTMKTVNQNLGWAFLYNIVGIPIAAGLLFPVNGTMLTPSIAGALMGLSSIGVMTNSLLLRFRFSRKRKQIHVVSQKIETHVDSDLVDRKGKLKYGQ 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2382 749 FunFam Copper-transporting ATPase PAA1 chloroplastic 519 670 - -
Dere02g2382 749 FunFam Copper-transporting ATPase PAA1 chloroplastic 402 534 - -
Dere02g2382 749 SFLD p-type atpase 374 653 IPR044492 -
Dere02g2382 749 NCBIfam copper-translocating P-type ATPase 93 713 - -
Dere02g2382 749 SUPERFAMILY HAD-like 390 710 IPR036412 -
Dere02g2382 749 SUPERFAMILY Calcium ATPase, transduction domain A 192 280 IPR008250 -
Dere02g2382 749 ProSitePatterns E1-E2 ATPases phosphorylation site. 393 399 IPR018303 -
Dere02g2382 749 SUPERFAMILY Calcium ATPase, transmembrane domain M 146 385 IPR023298 -
Dere02g2382 749 Gene3D - 402 534 IPR023299 GO:0000166
Dere02g2382 749 PRINTS P-type cation-transporting ATPase superfamily signature 230 244 - -
Dere02g2382 749 PRINTS P-type cation-transporting ATPase superfamily signature 548 558 - -
Dere02g2382 749 PRINTS P-type cation-transporting ATPase superfamily signature 603 622 - -
Dere02g2382 749 PRINTS P-type cation-transporting ATPase superfamily signature 626 638 - -
Dere02g2382 749 PRINTS P-type cation-transporting ATPase superfamily signature 526 537 - -
Dere02g2382 749 PRINTS P-type cation-transporting ATPase superfamily signature 391 405 - -
Dere02g2382 749 Gene3D - 382 653 IPR023214 -
Dere02g2382 749 FunFam Copper-transporting ATPase 1, putative 162 284 - -
Dere02g2382 749 NCBIfam HAD-IC family P-type ATPase 150 415 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2382 749 NCBIfam HAD-IC family P-type ATPase 433 682 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2382 749 CDD P-type_ATPase_HM 46 711 - -
Dere02g2382 749 Pfam haloacid dehalogenase-like hydrolase 387 615 - -
Dere02g2382 749 Pfam E1-E2 ATPase 176 369 - -
Dere02g2382 749 NCBIfam heavy metal translocating P-type ATPase 111 712 IPR027256 GO:0006812|GO:0016020|GO:0019829
Dere02g2382 749 SFLD Haloacid Dehalogenase 374 653 - -
Dere02g2382 749 Gene3D - 161 284 - -
Dere02g2382 749 PANTHER ATP7, ISOFORM B 33 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2382 Dere-ChrDere02 24827476 24853311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2382 102 733 Primary Pumps ATPases AT1G63440 38.272 1.52e-123 392