Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2371 ATGACTTCCCTTCCTTTTCCACCTGTTCAACCAAAAGCTGGTTGCTTTGAACCAAATAATGGCTCTAGAGTTGTACAACTACAAGCCAACCTGGAAACCCCATTTGAGAACGCAACCAGAAAGTCAACAAAATGCAGCAAAGATACTCGGAGAGTAGATGAGGGTGTGTTCCTGACATGGGAGGACTTGTGGGTGACTGTTCGAAATGGAAAGAACAGAAAGCCAATTTTGCAGGGTCTGACTGGGTATGCCAAGCCAGGACAACTTTTGGCTGTAATGGGTCCTTCAGGCTGTGGCAAAACCACCCTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAACACAAAGCAAACAGGGAAGATTCTAATCAACGGCCACAAACAAGCACTAGCTTATGGAACATCAGCATACGTAACCCAAGATGATGCTATGTTGTCAACTTTAACAGCCGGAGAGGCTTTATACTATTCATCTCAGCTCCAACTTCCAGATTCCATGTCTATAGAAGAGAAGAAGGAGAGAGCAGAGTTTACACTCAGAGAAATGGGTCTCCAAGATGCCGTTCACACGAGGATTGGAGGGTGGACATCCAAAGGTCTCAGTGGGGGACAAAAGAGGAGACTTAGCATTTGCATAGAAATTCTAACGCGGCCGAGACTTCTATTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCCTATTATGTTATGAGCAGAATTGCCAGTCTAAATCTCAGGGAAGGCATACAAAGGACTATCGTAGCATCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCATGACCTCTGTCTTCTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCTTCTGCTGCAAAGGAGTTTTTTGCTTCAATGGGCTTTCCTTGCCCAAGTCTCTACAATCCTTCTGATCATTTCTTAAGGGTTATAAACAAGGATTTTGAGCAGGATGCTGAAGAAGGCTTTGGCATAGGAGTAACCACAGAAGAAGCCATTAATATCCTTGTAAACTCCTATATATCTTCTGAATTTCGCACACAAATTCAGAAAGAAGTGGAAAAAATAACTGAAAGTGATTCAGATGTTATAGAGAAGAAGAGAATCCACGCTTCATTTATTACTCAATGCCTCATTCTTATAAGAAGATCTTCCTTGCATATGTACCGCAACATGAGCAATTACTGGTTACGTCTTGCTGTATATGCTGCGATAGCTATTAGTCTGGGTACTATATTCTATGACATTGGCTCAAGCATTGGATCTATTCAGGCCAGAGGGTCGCTGCTCACTTTTTTCATTTCAGTCCTTACTTTCATAACCCTCATTGGTGGATTCCCTCCATTTTTAGAGGATATGAAGGTATTTAAACGAGAGCGACTGAATGGACATTATGGTGTTACTGCTTTTCTCATTGGCAACACATTTTCTTCTGTTCCGTACATGCTACTGATATCTCTGATACCTGGAGGAATAGTTCATTACCTTTCCGGGCTGCACAAAGGACTTGAACACTTTCTGTACTTAATCTCTGTGCTGTTTGCCACTGTTATGTCTGTTGAGAGCCTCATGATGGTCGTTGGGAGTATCTTCCCCAACTTCATAATGGGCATGATCATTGTTGGTGGAATTCAAGGAATCATGATCTTAATTGGTGGTTTCTATAGGCTGCCGAACGATCTTCCCAAGCCATTTTGGAGGTACCCTTTATACTATGTTTCCTTCCACAAGTATGCCTTCCAAGGCTTGTTCAAGAATGAATTTGAAGGTTTAACATTTGCTACTGATCAAGATGGAGGCACCAAAACCATTAGTGGTAGAGACATTCTGACAAGCACATGGCAGGTGGAAATGGGTCACTCTAAGTGGGTCGATCTTGCTATCTTGTTTGGAATGATTGTTCTATATCGACTTCTGTTTTTGGCCATTACTAAGAGCAAGGAGAAGGCAAAGCCCATTGTTGCAGCTATCAGTTGTCCCCAAGCAAAACTTTTCAGAGACCAGAAGCAATGA 2025 0.4257 MTSLPFPPVQPKAGCFEPNNGSRVVQLQANLETPFENATRKSTKCSKDTRRVDEGVFLTWEDLWVTVRNGKNRKPILQGLTGYAKPGQLLAVMGPSGCGKTTLLDALAGRLGSNTKQTGKILINGHKQALAYGTSAYVTQDDAMLSTLTAGEALYYSSQLQLPDSMSIEEKKERAEFTLREMGLQDAVHTRIGGWTSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNLREGIQRTIVASIHQPSSEVFQLFHDLCLLSSGETVYFGPASAAKEFFASMGFPCPSLYNPSDHFLRVINKDFEQDAEEGFGIGVTTEEAINILVNSYISSEFRTQIQKEVEKITESDSDVIEKKRIHASFITQCLILIRRSSLHMYRNMSNYWLRLAVYAAIAISLGTIFYDIGSSIGSIQARGSLLTFFISVLTFITLIGGFPPFLEDMKVFKRERLNGHYGVTAFLIGNTFSSVPYMLLISLIPGGIVHYLSGLHKGLEHFLYLISVLFATVMSVESLMMVVGSIFPNFIMGMIIVGGIQGIMILIGGFYRLPNDLPKPFWRYPLYYVSFHKYAFQGLFKNEFEGLTFATDQDGGTKTISGRDILTSTWQVEMGHSKWVDLAILFGMIVLYRLLFLAITKSKEKAKPIVAAISCPQAKLFRDQKQ 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2371 674 Gene3D - 56 374 IPR027417 -
Dere02g2371 674 SMART AAA_5 86 275 IPR003593 GO:0016887
Dere02g2371 674 FunFam ABC transporter G family member 11 56 343 - -
Dere02g2371 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 300 IPR027417 -
Dere02g2371 674 Pfam ABC-2 type transporter 260 318 IPR043926 GO:0140359
Dere02g2371 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 661 - -
Dere02g2371 674 Pfam ABC-2 type transporter 379 592 IPR013525 GO:0016020|GO:0140359
Dere02g2371 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 303 IPR003439 GO:0005524
Dere02g2371 674 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524|GO:0016887
Dere02g2371 674 Pfam ABC transporter 78 228 IPR003439 GO:0005524
Dere02g2371 674 CDD ABCG_EPDR 55 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2371 Dere-ChrDere02 24607270 24610547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2371 87 238 Calmodulin-binding Proteins AT2G36910 31.056 3.32e-08 55.1