Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2370 ATGAGCATGATGATGACCTGCTTTCGGAAAAGGGATGAAGAAACACACAAAGACTCCTCCTCAAGAAAAGGGAAGATCAGAAGCTTGGAAATGGAGGAGAGGATAGAGGTAGAAGATGATGATGAAGAAGAAGATGGTGTCTGTGTGACATGGGAGGATCTGTGGGTGACTGTGTCAAGAGGGAAAGAAGGGTCCAAGCCAATCCTTCAAGGGCTCACTGGTTATGCCAAGCCTGGAGAGCTCTTGGCTATCATGGGTCCTTCTGGCTGTGGAAAGTCCACCCTTCTTGATGCGTTAGCAGGTAGGTTGGGTACAAAGGCAAAGCAGACAGGAAATATCCTAATCAATGGCCACAAACAAACACTAGCTTATGGAACATCAGCATATCTGACGCAAGACGATGCAATACTGACCACCCTGACGGTGGGAGAAGCAGTGCACTACTCAGCTCAACTCCAACTTCCTGATTCGATGTCAAACGCAGAGAAGAAGGAGAGAGCAGAATTCACAATCAGAGAAATGGGTCTGCAAGACGCGATTCACACAAGGGTTGGAGGGTGTGGCTCCAAGGGCATCAGTGGGGGCCAAAAGAGGAGGGTTAGCATCTGCATTGAGATCCTCACACGCCCTAGCCTTCTCTTCCTTGATGAGCCAACCAGTGGGCTTGATAGTGCTGCGTCGTACTATGTCATGAGCAGAATTGCAAGCTTGAATCAAAAGGATGGCATTCGGAGGACTGTTATTGCATCAATACATCAGCCTAGCAGTGAGGTTTTCCAGCTTTTTCACAACCTTTGCCTTCTGTCTTCTGGTCAGGCTGTGTACTTTGGCCCTACTTCTGCTGCAAATGAGTTTTTTGCATCAAATGGTTTTCCCTGCCCATCTCTCCGGAACCCCTCTGATCATTTTGTGAAAACCATCAATAAGGATTTTGAGAAGGAGGACCCCGAGCAAGGATTATCTGGAGGACTAAGCACAGAAGAAGCAATTCATATCCTTGTGAAGTCATTCAAGTCATCTGCAGTCGGTCACCAGGTTCAAACAGAAGTGGTCAAAATAAGAGAAAGGGATTCTAGTGCAATGGAGATGAAAAGTCATGCTCCCTTCTTCAAGCAGTGCTTCATTCTTGCAAGAAGATCATTTGTGAATATGTATCGCGATGTAGGCTACTACTGGTTACGTCTACTTATCTATGGTGGATTGGCTATAAGTCTTGGTACTATCTTCTATAATATTGGCTCAAGCAATGGATCAGTTCAGGCCAGAGGTTCACTGCTCACGTTTGTAGCCTCATTTCTGACTTTCATAACCATTGGTGGGTTCCCTTCCTTTGTGGAGGACATGAAGGTATTTGAAAGAGAAAGACTAAATGGGCATTATGGTGTTACTGCATACACCATTGGACACACATTCTCTTCTATACCATTCTTGCTTTTGATGTCACTGATTCCAGGAGCAATAGTTTATTACCTAACTGGACTTCACCAAGGTTATCAACACTTTCTGTACTTCACTTCTGTGCTTTTTGTTTCTGTAATGCTGGTTGAGAGCCTCATGATGATTGTCACAAGTATAGTTCCCAACTTCTTGATTGGAATAATCACTGGTGCTGGAATTCTTGGAGTTATGATGTTAAACGGCGGATTCTATCGCCTACCTGCAGAACTTCCCAAGTTCTTGTGGAGATATCCTTTGTACTACATTTCCATTCACAAGTATGCCAACCAAGGATTGTTCAAGAATGAGTTTGAAGGTCTAACATTTACTGACAATCAAGCTGGAGAGCCTAGGAATATTACTGGGGAAGAAATGCTGAGAAACATTTGGCAAATTAAAGTTGATCACTCCAAGTGGTTCGATCTTTTCTTACTGCTAGAAATGGTAGTTCTGTACAGAGTTCTGTTCTTGGTTATCATTAAGAGCATTGAGAAGGTGAAGCCTATTGTTGCAGCCTTCAAGTGA 1962 0.4409 MSMMMTCFRKRDEETHKDSSSRKGKIRSLEMEERIEVEDDDEEEDGVCVTWEDLWVTVSRGKEGSKPILQGLTGYAKPGELLAIMGPSGCGKSTLLDALAGRLGTKAKQTGNILINGHKQTLAYGTSAYLTQDDAILTTLTVGEAVHYSAQLQLPDSMSNAEKKERAEFTIREMGLQDAIHTRVGGCGSKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIRRTVIASIHQPSSEVFQLFHNLCLLSSGQAVYFGPTSAANEFFASNGFPCPSLRNPSDHFVKTINKDFEKEDPEQGLSGGLSTEEAIHILVKSFKSSAVGHQVQTEVVKIRERDSSAMEMKSHAPFFKQCFILARRSFVNMYRDVGYYWLRLLIYGGLAISLGTIFYNIGSSNGSVQARGSLLTFVASFLTFITIGGFPSFVEDMKVFERERLNGHYGVTAYTIGHTFSSIPFLLLMSLIPGAIVYYLTGLHQGYQHFLYFTSVLFVSVMLVESLMMIVTSIVPNFLIGIITGAGILGVMMLNGGFYRLPAELPKFLWRYPLYYISIHKYANQGLFKNEFEGLTFTDNQAGEPRNITGEEMLRNIWQIKVDHSKWFDLFLLLEMVVLYRVLFLVIIKSIEKVKPIVAAFK 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2370 653 Pfam ABC-2 type transporter 252 308 IPR043926 GO:0140359
Dere02g2370 653 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524|GO:0016887
Dere02g2370 653 MobiDBLite consensus disorder prediction 7 33 - -
Dere02g2370 653 FunFam ABC transporter G family member 11 47 336 - -
Dere02g2370 653 SMART AAA_5 78 267 IPR003593 GO:0016887
Dere02g2370 653 Pfam ABC transporter 70 220 IPR003439 GO:0005524
Dere02g2370 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 49 295 IPR003439 GO:0005524
Dere02g2370 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 34 650 - -
Dere02g2370 653 Gene3D - 48 317 IPR027417 -
Dere02g2370 653 Pfam ABC-2 type transporter 372 583 IPR013525 GO:0016020|GO:0140359
Dere02g2370 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 284 IPR027417 -
Dere02g2370 653 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2370 Dere-ChrDere02 24575602 24580456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2370 65 280 Calmodulin-binding Proteins AT2G36910 26.786 3.19e-09 58.5