Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2352 ATGGACATGCCCTGTGTATACAAGAAGCTTGAGACTAAAATAAGACCCAGAATTGATGCCTATGACCCTAATAGGGGCCTTGACACGATAGTAGGGATGCATAGAACTCAACTTCTTGGTGGACAAAAGAAAAGGATTGCTATTGTAAGGGCAATATTAAAGAACCTTAAAATTCTCCTTCATAATGAAGCAATAAGTGCTCTTGATGCTGAGTTTGAATGTGTTATTCAAGATGCATTAGTAAATGTTATGTTAAATAAGACCACAGGTATTGTTGCACATCAATTGGCAACTGTAAGAAACGTAGATGCCATTGTGGTGGTGAATCAAGGGAAAATAGTGGAACATGATTATACTTCTTCCAATGTTGAAAAAGGTGTTGAAGAAGCTAAAGTTGGAGAGAAATCTACTACTAGTTTTAACCTAGACAGAAACATGTCTACTTCTAAGATCGAGAGACTCTTTAGGTTGAGATCAATAAGCAGAGCTTCATTAGGATGCCAACATTTTCTCTCACCTAGCCTTGGTCTTACTAATGAAATTGATATATATTCTTTTAGAGAAGGAGGTGATGATCTTGAAAAGGCTAAATTTAATAATCAAAAGCAGCATAAGGTGTTGTATGAAGAAGCCACTCAAGTGGCAAGTGATACTGTTAGTAGCTTTAGAACTGTTACTTATAGTTTCTTTGTTATAACAATTACGGCTATTGGAGTTTCCTTGAGTAGTACCTCGGTTTTAGACATCTACAAGTGCAACGATTCTCGAGTTTCAATATTTGAAATTCTGGATAGCAAACCTAGCATTGACTCTAGTAATGATGACGAGAAGACATTGGAATCTGTAAATGGTGATATTGAACTTAAAAATGTTGGCTTCAAATTCCCAACATGGCCTGATGTTCAAGTTTTCAGAGATTTATGTCTAACCATACCCTTTGGAAAGAGCGTATATTCAAGAGGCTTTAGACATCTTATGGTGAACAGAACCACCACAGTGGTAGCTCATCGCCTCACAACATTCAAAGGGGCAGATGTTATTGCAGTAGTAAAGAATAAGGAGATTGCTGATAAAGGAAGACAAGATGTGTTGATGAAGATTACTGATGGATTTTATACTTCATTGGTGGCTCTTCATATAAGTTCATCATAA 1152 0.3655 MDMPCVYKKLETKIRPRIDAYDPNRGLDTIVGMHRTQLLGGQKKRIAIVRAILKNLKILLHNEAISALDAEFECVIQDALVNVMLNKTTGIVAHQLATVRNVDAIVVVNQGKIVEHDYTSSNVEKGVEEAKVGEKSTTSFNLDRNMSTSKIERLFRLRSISRASLGCQHFLSPSLGLTNEIDIYSFREGGDDLEKAKFNNQKQHKVLYEEATQVASDTVSSFRTVTYSFFVITITAIGVSLSSTSVLDIYKCNDSRVSIFEILDSKPSIDSSNDDEKTLESVNGDIELKNVGFKFPTWPDVQVFRDLCLTIPFGKSVYSRGFRHLMVNRTTTVVAHRLTTFKGADVIAVVKNKEIADKGRQDVLMKITDGFYTSLVALHISSS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2352 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 118 IPR027417 -
Dere02g2352 383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 377 IPR027417 -
Dere02g2352 383 Gene3D ABC transporter type 1, transmembrane domain 213 275 IPR036640 GO:0005524|GO:0016020
Dere02g2352 383 Gene3D ABC transporter type 1, transmembrane domain 137 147 IPR036640 GO:0005524|GO:0016020
Dere02g2352 383 Gene3D - 25 136 IPR027417 -
Dere02g2352 383 Gene3D - 276 317 IPR027417 -
Dere02g2352 383 Gene3D - 325 378 IPR027417 -
Dere02g2352 383 PANTHER ABC TRANSPORTER B FAMILY 322 378 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2352 Dere-ChrDere02 24164953 24170471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2352 228 317 Calmodulin-binding Proteins AT2G36910 34.444 2.69e-13 69.7