Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2324 ATGGAGAACGAGCCTCTGCTCCCGTATGCCAGTCCCAGAAAGAAGCCTCCGCCACCGCCGCCGCCGCTCTTCCCTTTGCCGGAGCACAATGAGGTCGTTCTTCCTTTTAGCCCTTCAGAGTTTAAGGACCGCCTTATCTTTGGCCCTTCTACTTCCCCAAATGGTTCTTCTCCGTTAGTTGAGGCCTTGACACTTTCCCTCAATTCCCCAAAACCCTCCTCTTCTTCAGAAGAGCCTCAAGATACACAATCCCTACCGTCTTGGCTTATTGACCCCAATTACCCATCTCACAAGACTAATCTTCATCGCTCGAAAACCGCCCCGGCTATGGCGGTAATTAGCGATATTAACCACCAAAGCCCTGTGGGTAAATACCAATTCGGTTCCCAATCAATTGTTCGTCAAGCTGTCATTCTTCTTATTATTTATTTGTCGTTGGGGGTGTTTATTTATTGGTTCAATCGTCATAATTTTTCAGCAGCTGAGACTCATCCTGTTGTGGATGCTTTATATTTTTGTATAGTGACAATGTGTACGATAGGCTATGGTGATATTACTCCAAATAGTACAGCAACGAAACTGTTCTCAGTACTGTTTGTACTGGTGGGTTTTGGGTTTATTGACATATTGCTCAGTGGAATGGTCAGCTATGTTCTTGATCTGCAGGAGAATCACTTGCTCGAAACGGTGAAGAGAAGGGGTGAGATTGAGAAAGATTCGAGATCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATTAGGCTGAAGGTGGGCTTGGCATTAGGGGTTGTCGTACTTTGTATTGGAATTGGTTTTGCTGTAATGCATTTTGTGGAAGGGCTTGGATGGTTGGATTCTTTTTATCTTTCAGTTATGTCAGTAACAACTGTTGGGTATGGTGACCGGGCATTCAAGACGTTGCCTGGCCGCATCTTTGCTACAATATGGTTGCTTGTATCGACACTTGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAGGCAAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGGTTCTCGGTCAGGATATGACTATTTCTGAGTTTCTTGCTGCAGATATAGACAACAATGGCTTTGTGAGTAAATCTGAATATGTCATTTACAAGCTTAAGGAGATGGGAAAAGTTTCAGAGAAAGACATAATGCAGATAAGTGAGAAGTTTGATAAGATTGATGCTGGCAACTGTGGAAAAATTACTCTAGCTGATCTCATGGAGGGTCGACATTGA 1257 0.4415 MENEPLLPYASPRKKPPPPPPPLFPLPEHNEVVLPFSPSEFKDRLIFGPSTSPNGSSPLVEALTLSLNSPKPSSSSEEPQDTQSLPSWLIDPNYPSHKTNLHRSKTAPAMAVISDINHQSPVGKYQFGSQSIVRQAVILLIIYLSLGVFIYWFNRHNFSAAETHPVVDALYFCIVTMCTIGYGDITPNSTATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQENHLLETVKRRGEIEKDSRSYIIDVKKGRMRIRLKVGLALGVVVLCIGIGFAVMHFVEGLGWLDSFYLSVMSVTTVGYGDRAFKTLPGRIFATIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWVLGQDMTISEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQISEKFDKIDAGNCGKITLADLMEGRH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2324 418 PRINTS Two pore domain K+ channel signature 296 305 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dere02g2324 418 PRINTS Two pore domain K+ channel signature 175 203 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dere02g2324 418 Pfam Ion channel 264 333 IPR013099 -
Dere02g2324 418 Pfam Ion channel 138 218 IPR013099 -
Dere02g2324 418 SUPERFAMILY EF-hand 351 414 IPR011992 -
Dere02g2324 418 Gene3D - 327 417 - -
Dere02g2324 418 MobiDBLite consensus disorder prediction 66 92 - -
Dere02g2324 418 MobiDBLite consensus disorder prediction 1 29 - -
Dere02g2324 418 FunFam Two-pore potassium channel 5 122 231 - -
Dere02g2324 418 ProSitePatterns EF-hand calcium-binding domain. 362 374 IPR018247 -
Dere02g2324 418 FunFam Two-pore potassium channel 3 241 355 - -
Dere02g2324 418 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 137 392 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dere02g2324 418 SUPERFAMILY Voltage-gated potassium channels 133 252 - -
Dere02g2324 418 Gene3D - 130 233 - -
Dere02g2324 418 Gene3D - 263 326 - -
Dere02g2324 418 MobiDBLite consensus disorder prediction 10 28 - -
Dere02g2324 418 SUPERFAMILY Voltage-gated potassium channels 248 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2324 Dere-ChrDere02 23763705 23769079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2324 1 416 Ion Channels AT4G18160 64.692 0.0 529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2324 02 23763705 23769079 Dere02g2324 02 23763705 23769079 ECH