Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2323 ATGTCTGATGAACCTGGTAAGGAACTTTACTATCATGATGACCTTTTCTCAGACCATAATCAGCAGGCCAGAGTTGGATCTACCATGTTCTGTGAGAAGAACTTCTCTTCCTTTCATATTCCTGGTCCTTCATCATCAGGGTTTGATGATCCCTCATACATGAGCTTCATTGAATGCCTGCAAGGAGGCATGGACTACAATTCTCTTGCTACTTCCTTTGGCATGTCTCCTTCCTCATCAGAGGTTTTTTCTTCTGTTGAAGGCAATAATCAGAAGCCAGCAGAAGCTCCTGGAGATTTAGGTGGTGGTAGGAGTGAAACCCCGGTGACTCAGAACTCTTCATTCTCTAATTCCTCTTCTTCTGAAGCTGGGGCTGAAGAAGAGGATTCAGGGAAGAGCAAGAAAGATAGCCAGGTCAAATCAGAAGAAGGCTCTAAGAAGAAAGGGAATAAGGACAGGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGCGATGTTGATCACCTAGAAGATGGTTACAGATGGAGAAAATATGGACAGAAAGCCGTCAAGAATAGCCCTTACCCAAGAAGCTACTACAGGTGCACGACGCAGAAGTGCACAGTGAAGAAACGCGTGGAAAGGTCATATCAGGATCCAACCACTGTGATAACAACGTATGAGGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCGATGTTCACACCTTCTTCGCTGTTCACGGCGGCGCCTACACCCTCGTTCGCCGGCGCCGCTGCCTACATGCCTCACCACCAGATCAACGCAAGTGCTTCATCCTCCTCCTCCAACATTTATTATAATCACAACAATGTTTCTTCTCTTCTTCAGCAGCAGTATCATCATCACCAGCTTCCTCCTCATGACTATGGCCTCCTCCAGGACATTCTCCCTTCCATGTTCCTCAAACAAGATCCTTGA 978 0.4744 MSDEPGKELYYHDDLFSDHNQQARVGSTMFCEKNFSSFHIPGPSSSGFDDPSYMSFIECLQGGMDYNSLATSFGMSPSSSEVFSSVEGNNQKPAEAPGDLGGGRSETPVTQNSSFSNSSSSEAGAEEEDSGKSKKDSQVKSEEGSKKKGNKDRKKGEKKQKEPRFAFMTKSDVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPTTVITTYEGQHNHPVPTSLRGNAAAMFTPSSLFTAAPTPSFAGAAAYMPHHQINASASSSSSNIYYNHNNVSSLLQQQYHHHQLPPHDYGLLQDILPSMFLKQDP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2323 325 SMART WRKY_cls 176 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2323 325 MobiDBLite consensus disorder prediction 77 166 - -
Dere02g2323 325 Gene3D WRKY domain 161 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2323 325 MobiDBLite consensus disorder prediction 105 124 - -
Dere02g2323 325 MobiDBLite consensus disorder prediction 77 91 - -
Dere02g2323 325 Pfam WRKY DNA -binding domain 177 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2323 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 283 IPR044810 GO:0003700
Dere02g2323 325 MobiDBLite consensus disorder prediction 125 166 - -
Dere02g2323 325 ProSiteProfiles WRKY domain profile. 171 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2323 325 FunFam WRKY transcription factor 57 162 236 - -
Dere02g2323 325 SUPERFAMILY WRKY DNA-binding domain 168 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2323 Dere-ChrDere02 23749599 23751099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2323 43 325 WRKY Transcription Factor Family AT4G18170 50.680 3.64e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g2323 WRKY 2.5e-25 CL0274