Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2315 ATGTTGTCTCAAAAGGTCAGTTTCACTATAGTCATAGTTTTACTCTTTTCCATTGTGGCTATACTTTCAAATGCAGAATCAAGCTCATTAGGTGTTGATATTGAAGCTTTGAAAGCTTTCAAAAGCTCCATCACCCATGACCCAAATGGGGCACTGGCGGATTGGGTTGACACAACCTACTATTGCAACTGGTCTGGCATTGCGTGTGATCCATCTTCACAACATGTCATCTCACTCACTCTGATTGCTCAGAAGCTCCAAGGCAAGGTTTCACCATTCCTGGGCAACATTTCATCCCTCCAAGTTCTTGACTTAACTTCAAATTCATTTTCTGGGTTCATTCCTCCTCAGCTCAGCCTTTGCTCCCAACTTCTTCAGCTACTCCTTGTTGACAACTCTCTATCTGGTCCAATACCACCTGAGCTAGCAAACCTGAAAAATCTGCAGTATTTGGATCTGGGTAGTAACAACCTGAATGGAAGCCTCCCTGAAAGCTTATTTAACTCCACCTCTTTGTTGGGTATTGCTTTTGATTCTAACAATTTAAATGGTGAAATCCCTTCAAACATAGGCAATCTGGTCAACATTATACAAATTGCAGGATTTAATAATAAATTTGTTGGATCTATTCCTCTTTCCGTGGGTAAGTTAAGGGCTTTACAATCTCTTGATTTTAGTCAAAACCAGTTGTCAGGAGAGATACCTAGAGAGATTGGGAATCTGAGGAACTTAGAATATCTTCTCTTGTTTGAAAATTCCTTGTTTGGGAAAATCCCTTCTGAACTTGGTCACTGTAAGAAACTAGTGAACCTTGAACTATACAGAAATCAATTGTCTGGGAGCATTCCTTTTGATCTGGTAAACTTAGTTCATTTGGAAACATTGAGGTTATATGAAAATAACTTCACCTCTACAGTTCCATCTTCCATATTCCAGCTGAAATCATTAACCAACTTGGGACTATCACAGAATCAGTTAGAGGGAACAATATCTTCTGAGATTGGATCCTTGAGATCACTAAAAGTTCTTACCTTGCATTCAAATATGTTTACTGGACAGATTCCTTCCTCAATTACAAACTTGACAAACCTAACATATCTCTCAATGAGTCAGAATCTCCTTTCAGGTGAACTTCCTTCTAACATAGGAGTGCTTTATAATTTGAAGTTTCTAATCCTGCACCACAACCTTTTCCATGGTCCAATTCCCCTTAGCATTACCAATTGTACTAGCATGGTGAATTTAAGTATGTCTTTTAATGCGCTAAATGGGAATATTCCTGAGGGCTTTGCAAGAATGCCTAATCTTACTTTCATGTCTCTTTCATCCAACAAATTGTCTGGTGAAATCCCGGATGATCTCTTCAACTGCTCAAATCTTCGGACTCTTAGTTTGGCAGTGAACAATTTTAGTGGGATGCTAAAACCTGCTATCCAGAACCTGTTTAATCTCAGGTTACTACAGTTGAATCTGAATTCTTTCACAGGGCCTATTCCACTCGAGATTGGGAAATTAATTCAGCTTATAACTTTATCACTTTCTGATAATAGATTTTCTGGTCACATTCCATTGGAGCTATCAAAACTCATTCTCCTTCAGGGTCTCTTCTTGCATGGGAATGCATTGGAAGGCACAATACCCGATCAACTCTTTGAACTCAACCAACTAACTGAGCTTGATCTGCATCTGAACAAGTTAATTGGTCAAATCCCAAAGGGTTTCTCAAAGCTTGGGATGCTTTCCTACTTAGACCTCCATGGGAACAAGTTTAATGGGTCTATTCCAAGAGAATTGGGTCAGCTCAGACAGCTCTTAATGTTGGATCTCTCACAGAACCATCTCACGGGGTCAATTCCTGGGGATGTCATTGCACATTTCAAAGGCATTCAGATGTATCTTAATCTGTCATATAACCACTTCATTGGAGCTATACCGGAAGAGCTGGGTATGTTGGAAATGGTACAGGCCATTGATATTTCAAACAACAATCTTTCTGGTGTCATTCCTAGGACACTTTCAGGGTGCAGAAATTTATTCAATCTTGATCTTTCAGGAAACAATATCTCAGGTCCTATTCCTGCAGAAGCTTTCACTCAGATGGACTTGCTTCAAAGCTTGAACCTTTCAAGGAACCATTTAGATGGTGAAATCCCTGGGATATTGTCAAAGCTTGAGCAACTTATTTCCTTAGATCTTTCTCAGAATAACTTGAAGGGAACTATATCTGAGAACTTCACCATTCTCTCCAACCTTAAGCTTCTCAACCTTTCTTTTAACCAACTTGAAGGTCAAGTTCCCTCGAGTGGAATATTCTCGCATATCAATTCATCTGAATTGATGGGAAACCCTGCTCTTTGTGGAACTGAATTCCTTAGGCCATGCAGGAAAACTACAAATAGTTCTCATTCACTATCCAGGAAGAGCATATCTATTATTGCTTCACTTGGATCTGTTGCTATACTTCTACTGCTAGTGTTTGTGATTCTATTTCTCAGACGAGGCGCCAAATTGTGTTGCTCAAACAAGATTGAGAATCCTAAAACACCAAACTACACTCCAGCTTTGACTCTTGAAAGATTTGATAGAAAGGACTTAGAAAATGCTACTGGTTTTTTCAGCTCAGAAAACGTCATTGGAGCTAGCAGTTTGAGCACTGTTTATAAGGGTCAATTGGAAGATGGCAGGACAGTGGCGATAAAAAAACTGAACTTGAACCAGTTTCCTGCAGAATCTGAAAAGCTCTTCAAGAGAGAAATAAGCACTTTGAGCCAGCTGAGGCATAGGAATTTGGTCAAGGTACTTGGGTATGCTTGGGAGAGTGGGAAGATAAAGGCTTTGGTTCTAGAGTACATGCCGAATGGGAATCTGGAGAGCATAATACATGATGAAGGGATGGATCAGTCTAGGAGGACATTATCTGAAAGGTTCAGTGTTCTCATTTCTGTTGCTAGTGGATTGGATTACTTGCACTCTGGTTATGATATTCCCATTGTGCACTGTGATTTGAAGCCTTCTAATATCCTTTTGGATGGAGATTGGGAGGCTCATGTGAGTGATTTTGGAACAGCTAGAATGCTTGGTCTCCATTTGCAGGATGGTGCTTCAGTTTCCTCATCAGCAGCTTTTCAAGGCACCATTGGTTATTTGGCTCCAGAGCTTGCCTACATGAGGAAATTAACGACCAAAGTTGATGTGTTCAGTTTTGGTATAATAATAATGGAGTTTCTAACAAGAAGGAGACCAACGGGGCTCTCGGACGAGGACGGCATCCCAGTAAGTCTGCGTGAAATAGTGCAGAAAGCACTTGCAGATGGAACAAAACAACATATTCTTAAACTTGTGGATCCTATGTTGGCTTGTATTGTCTCTGATGAGAAGAAGCCTCATGAACAAGAACAAGCGTTGATGGAGCTCCTGAAGCTGTCGTTGTGCTGTACACTCCCAGAACCTGAAGAACGACCTAGTATGAACCAAGTTTTGTCTGTACTAATGATGTTGAAAACTTCAAGGAAGTTTCGTTAG 3522 0.4029 MLSQKVSFTIVIVLLFSIVAILSNAESSSLGVDIEALKAFKSSITHDPNGALADWVDTTYYCNWSGIACDPSSQHVISLTLIAQKLQGKVSPFLGNISSLQVLDLTSNSFSGFIPPQLSLCSQLLQLLLVDNSLSGPIPPELANLKNLQYLDLGSNNLNGSLPESLFNSTSLLGIAFDSNNLNGEIPSNIGNLVNIIQIAGFNNKFVGSIPLSVGKLRALQSLDFSQNQLSGEIPREIGNLRNLEYLLLFENSLFGKIPSELGHCKKLVNLELYRNQLSGSIPFDLVNLVHLETLRLYENNFTSTVPSSIFQLKSLTNLGLSQNQLEGTISSEIGSLRSLKVLTLHSNMFTGQIPSSITNLTNLTYLSMSQNLLSGELPSNIGVLYNLKFLILHHNLFHGPIPLSITNCTSMVNLSMSFNALNGNIPEGFARMPNLTFMSLSSNKLSGEIPDDLFNCSNLRTLSLAVNNFSGMLKPAIQNLFNLRLLQLNLNSFTGPIPLEIGKLIQLITLSLSDNRFSGHIPLELSKLILLQGLFLHGNALEGTIPDQLFELNQLTELDLHLNKLIGQIPKGFSKLGMLSYLDLHGNKFNGSIPRELGQLRQLLMLDLSQNHLTGSIPGDVIAHFKGIQMYLNLSYNHFIGAIPEELGMLEMVQAIDISNNNLSGVIPRTLSGCRNLFNLDLSGNNISGPIPAEAFTQMDLLQSLNLSRNHLDGEIPGILSKLEQLISLDLSQNNLKGTISENFTILSNLKLLNLSFNQLEGQVPSSGIFSHINSSELMGNPALCGTEFLRPCRKTTNSSHSLSRKSISIIASLGSVAILLLLVFVILFLRRGAKLCCSNKIENPKTPNYTPALTLERFDRKDLENATGFFSSENVIGASSLSTVYKGQLEDGRTVAIKKLNLNQFPAESEKLFKREISTLSQLRHRNLVKVLGYAWESGKIKALVLEYMPNGNLESIIHDEGMDQSRRTLSERFSVLISVASGLDYLHSGYDIPIVHCDLKPSNILLDGDWEAHVSDFGTARMLGLHLQDGASVSSSAAFQGTIGYLAPELAYMRKLTTKVDVFSFGIIIMEFLTRRRPTGLSDEDGIPVSLREIVQKALADGTKQHILKLVDPMLACIVSDEKKPHEQEQALMELLKLSLCCTLPEPEERPSMNQVLSVLMMLKTSRKFR 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2315 1173 ProSiteProfiles Protein kinase domain profile. 872 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2315 1173 Pfam Leucine rich repeat 655 713 IPR001611 GO:0005515
Dere02g2315 1173 Pfam Leucine rich repeat 555 614 IPR001611 GO:0005515
Dere02g2315 1173 SUPERFAMILY L domain-like 377 473 - -
Dere02g2315 1173 Pfam Protein kinase domain 873 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2315 1173 SMART LRR_typ_2 289 313 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 651 674 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 361 385 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 145 169 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 577 600 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 700 723 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 529 553 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 601 625 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 433 457 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 748 773 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 241 265 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 97 121 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 724 747 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 337 360 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 217 240 IPR003591 -
Dere02g2315 1173 SMART LRR_typ_2 675 699 IPR003591 -
Dere02g2315 1173 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 185 283 - -
Dere02g2315 1173 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 398 1162 - -
Dere02g2315 1173 PRINTS Leucine-rich repeat signature 727 740 - -
Dere02g2315 1173 PRINTS Leucine-rich repeat signature 748 761 - -
Dere02g2315 1173 FunFam Piriformospora indica-insensitive protein 2 284 379 - -
Dere02g2315 1173 SUPERFAMILY Protein kinase-like (PK-like) 852 1165 IPR011009 -
Dere02g2315 1173 SMART serkin_6 872 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2315 1173 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Dere02g2315 1173 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 835 950 - -
Dere02g2315 1173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Dere02g2315 1173 FunFam Leucine-rich repeat receptor-like protein kinase TDR 568 796 - -
Dere02g2315 1173 Gene3D Phosphorylase Kinase; domain 1 838 950 - -
Dere02g2315 1173 Gene3D Ribonuclease Inhibitor 269 381 IPR032675 -
Dere02g2315 1173 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 380 474 - -
Dere02g2315 1173 Gene3D Ribonuclease Inhibitor 194 267 IPR032675 -
Dere02g2315 1173 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 30 184 - -
Dere02g2315 1173 Gene3D Transferase(Phosphotransferase) domain 1 951 1172 - -
Dere02g2315 1173 Gene3D Ribonuclease Inhibitor 623 803 IPR032675 -
Dere02g2315 1173 SUPERFAMILY L domain-like 469 804 - -
Dere02g2315 1173 CDD STKc_IRAK 878 1164 - -
Dere02g2315 1173 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Dere02g2315 1173 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 475 567 - -
Dere02g2315 1173 SMART LRR_sd22_2 145 177 - -
Dere02g2315 1173 SMART LRR_sd22_2 724 753 - -
Dere02g2315 1173 SMART LRR_sd22_2 313 336 - -
Dere02g2315 1173 SMART LRR_sd22_2 217 243 - -
Dere02g2315 1173 SMART LRR_sd22_2 361 384 - -
Dere02g2315 1173 Gene3D Ribonuclease Inhibitor 384 621 IPR032675 -
Dere02g2315 1173 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 951 1171 - -
Dere02g2315 1173 SUPERFAMILY RNI-like 79 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2315 Dere-ChrDere02 23668354 23672100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2315 33 1173 Receptor kinase-like Gene Family AT5G46330 53.866 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere02g2315 Pkinase 2.2e-42 CL0016