LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g2309	ATGATCCCTGCAGTGTTAGGACAGTTGTATATAGGTCAAAATGGAAAGCGAAATTTAGCATATCGTTGCAAATTACTCCCACGTCGGCTTCTTTCTCAGATCAATGGGTTCATAAGTTCAGGCTTGTTGGTTACAAAGTTCGAACCTTTGAAAGCTGAATTTCTTTCCTTTTCTCCTTTATCTTCTGCAGCAGCAGAAGAAAGAGGAGAAAAGGAAATGGTAGAGCTGAATTTCTTTGTGTGTTATAACATTACTGCGAAAAACACCAATGAAATCTGGAAAAGTGCTGATATCCTCGGCAAGGAGCTTCCTACTCTGGCCATTCAAACTTGTTGGACCGTACTTATGAGTCGCCTTTTCATCTTCATCATCAGACCCTTGCATATACCTCGTCTTGTTGCTGAAGTTGCTACTGGTTTCCTTCTAAGTGCGCAGATTCTGGGGAGATTTCCAGCACTCTATGACATACTTTATCCTCTAGAAGGGATCCTCAATGTTGAAGTCTTGTGTCATTTAGGTGTAATCTACCATGCCTTCCTAACTGGCGTGGAAATTAACTTAGACAACGTCGTACGTATACAAAAGAAGGCTACAAGCATTGCGGTTGCGGGTGTAATCATTCCAATGGTGATGGGAGGGGGCTTATACGCTCTGCATCGAAAAACTTACACGCTTGAGCCTGATGAAATCCTTGAAAATAATTCCTTTAAAGCTTATTTGGTATGGGCTTTGGCTCTTACTGTCACGGGTTTTCCAGTACTTGCTGAAATCCTTGCCAGCCTCAAGCTCCTATATACCGAGCTAGGCAGATCAGCCTTAAAAGCAGCTGTAATTAGTGACACCTATTCTTGGCTTCTGTTTTTATTAGTGATGCCATTTAACCTTAACGATGGAAGAGGGATCTTCACTGTGATGACTACCTTAACATTCATCGCTGTCTGCATTTTTGTGGTTCGTCCTGTCCTTACACGAATTATTGATCGAAAGACTGAGCAGGAAGAATGGAATGATCACCAGTTGCTGTTTGTGTTGATGGGAACTCTTCTCTGTGCATACATTTCAGATATCCTTGGCTCACACAGCATTGTCGGGGCTTTTGTGTTTGGATTGATTCTGCCTCATGGGAGATTTACTGATGTGATGATACCAGCAGCAGATGATTTTGCTTCTGGTGTTCTAACACCACTTGTCTTTGCCGGCTCTGGCATGAGAATGAACTTGACAAGGGCTTTCTCTTGGAGCAATTGGGTATCTACAGTGCTGGTTATGGTCTTATTATGCATCCCAAAGATTCTCAGCACTTTAATGGCTACTTACTTTTCTGGCATACCTCTTCTAGATGGTTTGGGACTTGGATTGCTTATGAACACTAAAGGCATCATGGCACTGATCATGCTAAATATTGCTTGGGACAGATCGATTTTGAAGGTTTCATCCTATTCAATTATAGTGGCTTCTATTATGATGATGACTACATTATCATCAATTATTATCAACATCGCTTACAAGCCAAGAAAGCGATTTAAGATGGGCAAGCTGAGGACCATACAGAATTTAAAATTTGATTCAGAGCTCCGGATTTTGGCTTGTGTCCATGATACCCGCCATGCCAGAGGCATGGTGGCCATCCTTGAGAGCTTCAATGCCAGCAGAGTTTCCCCTCTCCATGTGTTTGCCCTTTACCTTGTTGAACTCACAGGTCGTGGTGTTTCTGTGTTCCTTGACCTCATGGAGCAACCTAGTTCCCACCCCAGAACACAACATCTTACGCAATCACAAGCTGAGCAAGAAAGCATTGTCGACACCTTTGAAGGATTAGCTCAGGCAAATGATGCTGTTCGAGTGGAAACATTCAATGTCGTGTCGAGTTATGCAAGCATTCATGAGGACATATTCAACTCAGCAAATGAGAAACGCGCAAGCCTGATCCTCCTCCCTTTTCACAAGCAGCTCAACTCACAAGGCTCTATGGAGATATTGAACAGTGCATACAAAGACATAAACCAGAATGTCATGCAAGAATCGCCTTGTTCTGTGGGGATCTTCGTTGATCGCGGTCTTCGTTCAATATCCAAAATTCATTATCGTATTCTCATACTCTTCATTGGTGGACCTGATGATCGTGAAGCCTTAGCCATCGCTTGGAGATTGGCAGCTCATCCCAGAGTCCAACTCACCGTGGTGAGGATGCTTCTGTGTGCTGAAGCTGCAGAAGAGGATTCAGAAGTTAACTTGGAAGCTCAAGGGATATTATCTTCAGTTTTGGACGGTGAGAAGCAGAAAGAGCTGGATGAAGACTATGTGAACACGTTTAGACTCAGGGCATTGAACAATGAGGATTCTATAACATACTCAGAGACTGAAGTTCATGCGGGTGAGGATATTCCTGCATTGCTGAATGACTTGGACCAAAATGACAACAATCTGTACATAGTAGGACAAGGGAGAGGAAGGAACTCTCGGTTATTCTCAAGGTTCTTGGAATGGTGTGATTGCCCTGAGCTTGGGGTTATAGGGGACATATTGGCTTCCAACAATATTGGGTCAGGATCTTCTGTGCTTGTTGTTCAGCAATATGGGTATGGTGGAATGGTGTTCGGAAAGACCTCTCAGCAGCCTCGCCCCCATGTGGACACCGAGAATGATGACTCTGATGCGCTTGTTGTCAGGTCTGAATATAGTTGA	2685	0.4354	MIPAVLGQLYIGQNGKRNLAYRCKLLPRRLLSQINGFISSGLLVTKFEPLKAEFLSFSPLSSAAAEERGEKEMVELNFFVCYNITAKNTNEIWKSADILGKELPTLAIQTCWTVLMSRLFIFIIRPLHIPRLVAEVATGFLLSAQILGRFPALYDILYPLEGILNVEVLCHLGVIYHAFLTGVEINLDNVVRIQKKATSIAVAGVIIPMVMGGGLYALHRKTYTLEPDEILENNSFKAYLVWALALTVTGFPVLAEILASLKLLYTELGRSALKAAVISDTYSWLLFLLVMPFNLNDGRGIFTVMTTLTFIAVCIFVVRPVLTRIIDRKTEQEEWNDHQLLFVLMGTLLCAYISDILGSHSIVGAFVFGLILPHGRFTDVMIPAADDFASGVLTPLVFAGSGMRMNLTRAFSWSNWVSTVLVMVLLCIPKILSTLMATYFSGIPLLDGLGLGLLMNTKGIMALIMLNIAWDRSILKVSSYSIIVASIMMMTTLSSIIINIAYKPRKRFKMGKLRTIQNLKFDSELRILACVHDTRHARGMVAILESFNASRVSPLHVFALYLVELTGRGVSVFLDLMEQPSSHPRTQHLTQSQAEQESIVDTFEGLAQANDAVRVETFNVVSSYASIHEDIFNSANEKRASLILLPFHKQLNSQGSMEILNSAYKDINQNVMQESPCSVGIFVDRGLRSISKIHYRILILFIGGPDDREALAIAWRLAAHPRVQLTVVRMLLCAEAAEEDSEVNLEAQGILSSVLDGEKQKELDEDYVNTFRLRALNNEDSITYSETEVHAGEDIPALLNDLDQNDNNLYIVGQGRGRNSRLFSRFLEWCDCPELGVIGDILASNNIGSGSSVLVVQQYGYGGMVFGKTSQQPRPHVDTENDDSDALVVRSEYS	894

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g2309	894	Gene3D	-	105	510	IPR038770	-
	Dere02g2309	894	Pfam	Sodium/hydrogen exchanger family	115	499	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Dere02g2309	894	Gene3D	-	525	835	-	-
	Dere02g2309	894	PANTHER	CATION/H + ANTIPORTER	80	859	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g2309	Dere-ChrDere02	23629014	23632241	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g2309	80	859	Antiporter Super Family	AT2G13620	37.342	0.0	555