Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2299 ATGTCGAGGAGAAAGGTTAGGGAGCCAAAGGAGGAAAATGTCACTCTTGGCCCAGCTGTCAGAGAGGGTGAACATGTTTTTGGCGTGGCCCATATTTATGCATCATTTAATGACACCTTCATTCATGTGACGGATTTGTCTGGGAGAGAAACCCTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAGTCTTCCCCATACGCTGCTATGCTTGCTGCACAGGATGTTTCTGTTAGATGCAAGGAACTTGGCATCACTGCTCTTCATATCAAGCTCCGGGCCACGGGTGGAAACAAGACAAAAACACCTGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGTTCTGGAATGAAAATTGGTCGTATTGAGGATGTGACTCCAATTCCTTCCGATAGCACTCGCAGAAAGGGCGGTAGAAGAGGTAGAAGGCTTTGA 453 0.4879 MSRRKVREPKEENVTLGPAVREGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSVRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2299 150 MobiDBLite consensus disorder prediction 130 150 - -
Dere02g2299 150 Gene3D Ribosomal protein S11 1 150 IPR036967 GO:0003735|GO:0005840|GO:0006412
Dere02g2299 150 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Dere02g2299 150 Hamap 30S ribosomal protein S11 [rpsK]. 3 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Dere02g2299 150 ProSitePatterns Ribosomal protein S11 signature. 115 137 IPR018102 -
Dere02g2299 150 FunFam 40S ribosomal protein S14 1 150 - -
Dere02g2299 150 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 3 145 IPR001971 GO:0003735|GO:0005840|GO:0006412
Dere02g2299 150 SUPERFAMILY Translational machinery components 24 146 - -
Dere02g2299 150 Pfam Ribosomal protein S11 28 146 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2299 Dere-ChrDere02 23557244 23559378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2299 1 139 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.647 3.11e-93 265