Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2295 ATGTCATTTTCCTGTGCAAAAAACTTCTTCCAGAGGTTCTGGGTAGATGAATTCCAAATGGGAAGTTTTGCCCACAGCAGCTTTTTGTCTAATGATCTCCTGCCATCCCTTGGAGCTCGAATCAATCAGGAAACCAGACTTCGAAGATACATAATCTCCCCTTTCAATCCCTGGTATAGGGCTTGGGAGATGTTACTGATTATTCTGGTCATTTACTCAGCCTGGATTTGCCCGTTTGAGTTTGCCTTTCTTCCTTACAAGCAAGATGCACTATTCATCATCGACAACACTGTCAATGGCTTCTTTGCCATTGACATCATACTGACATTCTTTGTTGCATATCTAGATGGCCACTCTTACCTTCTTGTTGATGAACCCAAGAAAATTGCTGTAAGGTACATATCTACCTGGTTTATTTTTGACCTCTGCTCAACTGCACCATTTCAGTCCATCAGCCTACTCTTCACTAGTCATAGCGGTGAGCTTGGCTTTAAACTGCTTAACATGCTGCGATTATGGCGTCTAAGACGTGTCAGCTTTCTGTTTGCAAGACTTGAGAAAGACATCCGCTTCAATTATTTCTGGACTAGGTGTACAAAGCTCATAGCTGTAACCTTGTTTGCAGTACATTGTGCCGGGTGCTTTAACTATCTGATCGCAGAAAGATACCCTGATCCTAAAAGGACCTGGATTGGTGCAGTGTACCCGAATTTCAAAGAACTAAGTCTCTGGGACAGATATGTGACTTCAATATATTGGTCCATTGTGACACTCACAACTACTGGCTACGGGGATTTACACGCTGAAAATACAAGAGAGATGCTGTTTGATATCTTTTACATGCTGTTCAACTTGGGATTAACGTCATATATCATTGGAAACATGACAAACCTTGTAGTCCACTGGACCAGCCGCACCAGAAACTTTAGAGACACAGTTAGAGCAGCATCGGAATTTGCATCAAGAAATCATTTGCCCCATCACATAGAAGATCAAATGTTGTCACACTTATGTTTGAGATTTAAAACAGAAGGACTGAAGCAACAAGAAACACTAAATGGTCTGCCTAAGGCAATTCGTTCAAGCATTGCGTACCATCTTTTCTTTCCCGTTGTGCAGAAAGTCTATCTCTTCCAAGGAGTTTCCCATGACCTTCTTTTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTCCCACCCAAGGAAGAAGTGATACTGCAGAACGAGTCTCCTACAGACCTTTATGTACTGGTTTCAGGGGCGGTGGATATTATTCGCTATATTGATGGGCAAGATCAAGTTCTTGGGAAGGCAATTGGAGGAGATGCATTAGGAGAGATTGGGGTTTTATACTGTAGGCCACAGCCTTTCACAGTTCGAACCACGGAGCTCTCTCAAATATTAAGACTTAGCAGAACTTCGTTAATGAATGCCATACAAGCAAACCCAGAAGATGCACAAATTATAATGAATAATCTTTTCATGAGACTTGAGGGACAATACCTGGGCTCTGAATATGCACGCACAAATCCTGGACTGAATTTTCATGAAATGCTTGATGGAACAAAAAGAGGAAGCTTCCCTCGTGCATGTGAAAACAATGCAAATGGAGATTTCAAAGACAGAGAGTCACAGGAAGCTATTGGTGATGCTGCAAAGAAAGAGCAACAAGATATGGTTGAAATTTTGCTCGAGACAGACACGAAAGCAAAGAATCCAAATCCCCCAGAATGGACGCCAATAGTTCCAGTAAAGCAGCAAGAGAACAAGAGAAATTCTGACCTCTTAGTGAGTGGTGAAAACAGGAAGAAACCAGATGACTATAGGATAGAGCTGATGGATAGGAATGATCTAACCAGAAGCAGAAGACATGAAGGTCCCAGATATATCAACTTACCAATAGAAGAAGTGTACACGAACTCCCATTCAGGTACTATCAATGGCCCAGGTGACAGAGAAAAGGCAAAACGCCAAAAAAAGAGAGTAACTATCCACTTGGTCTGTGAATACGGTAGTGCCTCACAGGGAAATGGGAAGTTGATAATTCTACCTGATTCGTTAGAAGAGCTGCTCAAGATTGCTGGTCAAAAGTTTGTAGGCTCCAAACCTACAGAAGTTGTTAGTGCAGAAAATGCAGAGATAGATGACATAAGCGTCATTCAAGATGGTGATCATCTCTTTCTTCTTTGCAGCAATAGAGAAAATTTGAGTTTGTGA 2217 0.4177 MSFSCAKNFFQRFWVDEFQMGSFAHSSFLSNDLLPSLGARINQETRLRRYIISPFNPWYRAWEMLLIILVIYSAWICPFEFAFLPYKQDALFIIDNTVNGFFAIDIILTFFVAYLDGHSYLLVDEPKKIAVRYISTWFIFDLCSTAPFQSISLLFTSHSGELGFKLLNMLRLWRLRRVSFLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIAERYPDPKRTWIGAVYPNFKELSLWDRYVTSIYWSIVTLTTTGYGDLHAENTREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRAASEFASRNHLPHHIEDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSSIAYHLFFPVVQKVYLFQGVSHDLLFQLVSEMEAEYFPPKEEVILQNESPTDLYVLVSGAVDIIRYIDGQDQVLGKAIGGDALGEIGVLYCRPQPFTVRTTELSQILRLSRTSLMNAIQANPEDAQIIMNNLFMRLEGQYLGSEYARTNPGLNFHEMLDGTKRGSFPRACENNANGDFKDRESQEAIGDAAKKEQQDMVEILLETDTKAKNPNPPEWTPIVPVKQQENKRNSDLLVSGENRKKPDDYRIELMDRNDLTRSRRHEGPRYINLPIEEVYTNSHSGTINGPGDREKAKRQKKRVTIHLVCEYGSASQGNGKLIILPDSLEELLKIAGQKFVGSKPTEVVSAENAEIDDISVIQDGDHLFLLCSNRENLSL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2295 738 Pfam KHA, dimerisation domain of potassium ion channel 660 728 IPR021789 -
Dere02g2295 738 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Dere02g2295 738 Gene3D - 60 300 - -
Dere02g2295 738 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Dere02g2295 738 PANTHER POTASSIUM CHANNEL AKT1 25 500 IPR045319 GO:0005249|GO:0006813
Dere02g2295 738 Gene3D Jelly Rolls 341 501 IPR014710 -
Dere02g2295 738 SMART cnmp_10 377 494 IPR000595 -
Dere02g2295 738 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Dere02g2295 738 CDD CAP_ED 377 490 IPR000595 -
Dere02g2295 738 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2295 738 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2295 738 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2295 738 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2295 738 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2295 738 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere02g2295 738 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Dere02g2295 738 ProSiteProfiles KHA domain profile. 661 738 IPR021789 -
Dere02g2295 738 FunFam Potassium channel KAT2 365 501 - -
Dere02g2295 738 FunFam Potassium channel KAT3 61 301 - -
Dere02g2295 738 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2295 Dere-ChrDere02 23515040 23518593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2295 1 728 Ion Channels AT5G46240 61.833 0.0 906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2295 02 23515040 23518593 Dere02g2295 02 23515040 23518593 ECH