Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2257 ATGGAGGAGGATGCGATTCAAGCACAGGCATGTAAATTCCCAAGACTCGGAAATGGCGGAAACGACTGCAACAAGATAGGTTCTAAAGGAAGCGAGCAATACCCAGACGGCGAAGAAAATGGAGAGCTGAAAAGAAGAGGTGGAGTTAGCGATGCCACCACAAATCGGTTCCATAGTTGGCATTCTTCAAGAATCATTAGGGTTTCTCGAGCGTCCGGAGGGAAAGATCGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACCGAAGGGTTAGGCTCTCTGTAACCACAGCAATCCAGTTTTATGATCTTCAAGATCGGCTTGGACTTGACCAACCCAGTAAAGCTGTGGAGTGGCTAATCAAAGCAGCTGCTGATGCTATTTCTGAGCTTCCATCACTGAACAACCCATTCCCTGATACCCCCAAGCAGCCAAGCGACGAGAAAAGGGGGAGTGTGGGAACTGAGCATGGGTTTGATACAGCTGATGCAGAGGTAGAAGGTGAGGGTGATTGTCATCAGACGCAAAGTCAGAACCTTTCTTTGTCTAAGTCTGCTTGTAGCAGCACTTCAGAGACAAGCAAAGGCTCCGGCGGCTTGTCTCTCTCCAGGTCTGAGATTCGTGTGAAGGCCCGCGAGAGGGCGAGGGAGAGAGCAGCAAAGGAGAAGGAGAAAGAGAATAATGCCCATAACCACAATGTGAATAACCCCATCTCTCAAACTGCTTCTTTCACTGAGCTTCTCACCGGTGGTATTAGTAGTGCTGTTCCTGCTACTACAAGTCCCACTGGTGATCATGAGCCTAATTTGTTCAACAAGTCAGGAAGACAGCAATGGTGTGCGACACCCATGGACTACTTCAGCTCAGGCCTTCTGGGAAATTCCTCTATTAGAACCCAGAATCAATCTTCAGGGTTCTCTGGACAAATCCAATTGGGAAATTCTTCCCTTCCCCTCCAGGCACTGTCTGTTTCACCATTCAATGCCTTGCTGGTTTCAACAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTTTGTCTCATCCTCTCCAGAGGTTTTCTTCACCTTTAG 1074 0.486 MEEDAIQAQACKFPRLGNGGNDCNKIGSKGSEQYPDGEENGELKRRGGVSDATTNRFHSWHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGLDQPSKAVEWLIKAAADAISELPSLNNPFPDTPKQPSDEKRGSVGTEHGFDTADAEVEGEGDCHQTQSQNLSLSKSACSSTSETSKGSGGLSLSRSEIRVKARERARERAAKEKEKENNAHNHNVNNPISQTASFTELLTGGISSAVPATTSPTGDHEPNLFNKSGRQQWCATPMDYFSSGLLGNSSIRTQNQSSGFSGQIQLGNSSLPLQALSVSPFNALLVSTGGPFSPIHRLFCLILSRGFLHL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2257 357 Pfam TCP family transcription factor 73 226 IPR017887 -
Dere02g2257 357 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 56 261 IPR005333 GO:0003700
Dere02g2257 357 MobiDBLite consensus disorder prediction 35 51 - -
Dere02g2257 357 MobiDBLite consensus disorder prediction 172 202 - -
Dere02g2257 357 MobiDBLite consensus disorder prediction 207 231 - -
Dere02g2257 357 MobiDBLite consensus disorder prediction 132 238 - -
Dere02g2257 357 Coils Coil 210 230 - -
Dere02g2257 357 MobiDBLite consensus disorder prediction 144 171 - -
Dere02g2257 357 ProSiteProfiles TCP domain profile. 74 132 IPR017887 -
Dere02g2257 357 MobiDBLite consensus disorder prediction 27 54 - -
Dere02g2257 357 ProSiteProfiles R domain profile. 206 224 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2257 Dere-ChrDere02 23088866 23090051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2257 55 293 TCP Transcription Factor Family AT4G18390 53.441 4.22e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere02g2257 TCP 1.8e-39 No_clan