Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2235 ATGCAGGCCAGAGAGGCTCCAGGAATCAATTATCAGCTCCACTCAAACCCATATCCATACCCAACTCATTACAGTGCTATACAGAACAATATATCCACATTCCAACTTCACAGATTCACCAATCAGCTATACAATTTCCAAAACCCACCTCAAGTTCAGGACTTCAGTTCTCAATCATCTTGTCTCAGCAGCAATTCCACCTCTGATGAAGCAGATGAGCAGCAGCAGAACCTCATCATCAACGAGAGGAAGCACAGGAGGATGATATCGAACAGAGAGTCTGCTCGTCGGTCACGCATGAGGAAGCAGAAGCACCTGGATGAGCTGTGGTCGCAGGTGGTGTGGCTCAGGAATGAGAACCATCAGTTGATAGATAAGCTGAACCATGTGTCGGAGAGCCATGACCGTGTGGTTCAGGAGAATGCTCAGCTCAAAGAGGAAGCTTCGGAGCTTCGTCAGATGTTAAGAGACATGCGCATCAACAGTCCCTGCCCTTCCTTGAGCCCTCTAGAGGATGTCCTCTGCAGCTCCTCTTACCTCGGATCTGACTCCTCGAACCAATCCTTAACAACCTCGGTCGACCTGCTTGGTTGA 594 0.4916 MQAREAPGINYQLHSNPYPYPTHYSAIQNNISTFQLHRFTNQLYNFQNPPQVQDFSSQSSCLSSNSTSDEADEQQQNLIINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDRVVQENAQLKEEASELRQMLRDMRINSPCPSLSPLEDVLCSSSYLGSDSSNQSLTTSVDLLG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2235 197 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Dere02g2235 197 FunFam BZIP transcription factor 81 132 - -
Dere02g2235 197 Pfam bZIP transcription factor 83 132 IPR004827 GO:0003700|GO:0006355
Dere02g2235 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Dere02g2235 197 MobiDBLite consensus disorder prediction 54 76 - -
Dere02g2235 197 Gene3D - 81 138 - -
Dere02g2235 197 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 17 169 IPR044521 -
Dere02g2235 197 Coils Coil 127 161 - -
Dere02g2235 197 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Dere02g2235 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Dere02g2235 197 MobiDBLite consensus disorder prediction 54 75 - -
Dere02g2235 197 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2235 Dere-ChrDere02 22899072 22899665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2235 43 163 bZIP Transcription Factor Family AT3G30530 72.358 3.79e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere02g2235 bZIP_1 2.7e-13 CL0018