Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2219 ATGGTTCATCAAGCTAATTTAGTTATCATTGGTGTCACTGTTGGTTTGGCCCTTGGAGTTTTTATTGCTTCCCTTATATTTTTTGGCATAAGGTGGTACAAGAAACGTGCTCATCTTAGACGATCAAAAGAGTGTAGTTTAGCCACTCTTCCAATACGTACAAATGGATTAGGAACAAGCACTGACTTTAGTGCCTCTCTTACAAGTTCCATATCCACTTCGGTGTCAGATAATCTGCAGAGGAACTCCCATTTCTCTTGGTGGAGTCATCAAAACAATGATCGGTTCTCTCCAACATCAGGCATTTTAAAATACTCATACAAAGAAATCCAAAAGGCCACACAGAATTTCACAACTATTTTGGGCCAAGGATCATTTGGTACAGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTAGCTGTGAAGGTGCTTGCTTCTAATTCCAAACAAGGGCAGAAAGAATTCCAAACAGAGGTGCTTCTGCTAGGAAGATTGCATCATCGGAATCTTGTGAATTTGGTAGGATATTGTGTCGATAAAGGACAGCACATACTGGTTTATGAGTTCATGAGCAATGGAAGTTTATCAAACCTTCTATATAGTGAGGAAAAGGATTTGAGTTGGAATCAAAGGCTTCAAATTGTTATTGATATTTCACACGGAATTGAATATCTTCATGAAGGAGCAGTCCCACCTGTCATACATCGTGATTTGAAGTCTGCTAATATATTGTTAGATCATTCAATGAGAGCCAAGGTTGCTGATTTTGGGCTCTCAAAGGAAGCGGTCTTTGACGGTCGGAATTCTGGTCTTAAAGGTACATACGGCTACTTGGACCCAGCATATATTTCCACAGGCAAGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATCATCATTTTTGAGCTCATTACAGCCATCCACCCACATCAAAATTTGATGGAATATATCAACCTCGCTGCAATGGATCATGATGGCATAGATGGGATACTTGACAAGCAACTTGTAGGAAAATGCAACCTTGAAGAAGTAAGGCAGCTTGCTAAAATTGCCCACAAGTGTTTGCACAAATCGCCTAGGAAACGGCCCTCTATAGGTGAGGTTTCACAGGATATATTGAGGATAAAAGAAAGGCGCCTTGTGAAAGAAGATACCATGTCATTTGCAGGCAGTAGCTTCTCCAGAGCTTTGAGTCGAATAGAGGATCAACAGGTTGAATTAAGTAGGTTAACCACCATGAACCACAGAGAAACTGGATGA 1266 0.406 MVHQANLVIIGVTVGLALGVFIASLIFFGIRWYKKRAHLRRSKECSLATLPIRTNGLGTSTDFSASLTSSISTSVSDNLQRNSHFSWWSHQNNDRFSPTSGILKYSYKEIQKATQNFTTILGQGSFGTVYKATMPTGEVVAVKVLASNSKQGQKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQHILVYEFMSNGSLSNLLYSEEKDLSWNQRLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEAVFDGRNSGLKGTYGYLDPAYISTGKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDHDGIDGILDKQLVGKCNLEEVRQLAKIAHKCLHKSPRKRPSIGEVSQDILRIKERRLVKEDTMSFAGSSFSRALSRIEDQQVELSRLTTMNHRETG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2219 421 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 191 398 - -
Dere02g2219 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Dere02g2219 421 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 6 380 - -
Dere02g2219 421 SMART serkin_6 115 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2219 421 Gene3D Phosphorylase Kinase; domain 1 78 190 - -
Dere02g2219 421 Pfam Protein tyrosine and serine/threonine kinase 117 373 IPR001245 GO:0004672|GO:0006468
Dere02g2219 421 SUPERFAMILY Protein kinase-like (PK-like) 84 372 IPR011009 -
Dere02g2219 421 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 89 190 - -
Dere02g2219 421 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Dere02g2219 421 ProSiteProfiles Protein kinase domain profile. 115 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2219 421 CDD STKc_IRAK 121 377 - -
Dere02g2219 421 Gene3D Transferase(Phosphotransferase) domain 1 191 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2219 Dere-ChrDere02 22755602 22761019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2219 7 370 Receptor kinase-like Gene Family AT5G61350 37.859 1.49e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Dere02g2219 PK_Tyr_Ser-Thr 2.9e-51 CL0016