Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2199 ATGGATAGCATCCTGGATCGATATGAAAGATATTCGCAGTCAGAACAACTTGCTGGAACTAACAATGATTCACAGGGAGACCCGTCCTTGGAATTATTCAAGCTCACTACTAGAGCTGAAGTTTTAGAGAAGAACCTAAGGAATTATGAAGGAGAGGATCTGGATTCCTTGGGTTTGAGAGAGCTTCAGAGTCTGGAGCGCCAGCTTGACAATGCTCTAAAGCGCATTCGAACAAGAAAGCACCAAGCCATGAATGAGTCCATCTCAGAGAGGCAAAGAAAGGTACGGTCGCTGAACTGTATATAA 306 0.4412 MDSILDRYERYSQSEQLAGTNNDSQGDPSLELFKLTTRAEVLEKNLRNYEGEDLDSLGLRELQSLERQLDNALKRIRTRKHQAMNESISERQRKVRSLNCI 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2199 101 MobiDBLite consensus disorder prediction 81 101 - -
Dere02g2199 101 Coils Coil 32 52 - -
Dere02g2199 101 Coils Coil 59 82 - -
Dere02g2199 101 ProSiteProfiles K-box domain profile. 25 101 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dere02g2199 101 Pfam K-box region 25 98 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2199 Dere-ChrDere02 22575188 22576469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2199 1 98 MADS-box Gene Family AT5G60910 57.576 7.72e-28 98.2