LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g2190	ATGAGACTAGTCATCTCAGCTCTCTCTGTTATAGTGCTGTTCTCTTATGCAGCTGCATATGATCCTCTGGATCCAAATGGAAACATAACGATCAAATGGGATGTCATGTCTTGGACCCCTGATGGCTATGTTGCGGTGGTGACAATCCACAATTTCCAAATGTTTCGGCACATCATGAATCCTGGGTGGACGCTAGGATGGACATGGGCTAAGAAAGAGGTTATATGGTCCATGGTAGGAGCTCAAACCACTGAGCAAGGGGACTGCTCTAAGTTCAAGGGCAATGTGCCACATTGCTGCAAGAAAACTCCCACAGTCGTGGACTTGCTTCCCGGTGTGCCTTACAACCAGCAATTCACAAACTGTTGTAAGGGTGGAGTGGTGGCTGCATGGGGCCAAGATCCTTCAGCAGCAATCTCCTCTTTTCAGTTAAGTGTTGGTCAAGCAGGTACTTCAAATAAAACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCGGGACCTGGCTATACTTGTGGCCCTGCCAAGATTGTCCCTTCCACCGCTTTCCTTACACCTGACCGGCGCCGCAAGACTCAGGCACTAATGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCGAGGAAGTACCCAAGCTGTTGTGTCTCTTTGTCATCCTTTTACAATGAAACCATCACGCCTTGCCCCTCTTGTGCGTGTGGCTGCCAGAACAAGAAGAACTGTGTCAAGAGCGACTCTAAAATTCTCAGCATGGTGGGAGTACACACTCCTAAGAAAGATAATGAACCACTGCTACAATGCACTCATCACATGTGCCCAATCAGGGTACACTGGCACGTGAAGCTCAACTATAAGGATTATTGGCGAGTCAAGATCGCCATCACAAATTTCAATTACAGGATGAACTACTCCCTTTGGACTCTTGCAGTTCAGCATCCAAATCTTAACAATGTTACCCAAGTTTTCAGCTTTGATTACAAGCCTCTGGGTGCCTACGAGTCCATAAATGACACTGGTATGTTTTATGGCATGAAGTACTATAATGATCTATTAATGGAAGCTGGAGCATCCGGCAACGTTCAGTCAGAGGTGCTTCTTCAGAAGGACAAGGATACTTTCACTTTCAAGCAGGGTTGGGCATTTCCTCGCAAGGTGTATTTTAATGGTGATGAATGCATGCTTCCCCCACCTGATACATATCCATTTCTCCCTAATTCTGCCCCTGTAAGTGTACTCAATTTCCTAGCATTCATCTTGTCATTGCTTTTCCTGTTAGCTGTGTGGTGA	1296	0.4606	MRLVISALSVIVLFSYAAAYDPLDPNGNITIKWDVMSWTPDGYVAVVTIHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSAAISSFQLSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKIVPSTAFLTPDRRRKTQALMTWNVTCTYSQFLARKYPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKSDSKILSMVGVHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLGAYESINDTGMFYGMKYYNDLLMEAGASGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNSAPVSVLNFLAFILSLLFLLAVW	431

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g2190	431	PIRSF	COBRA	1	431	IPR006918	GO:0010215\|GO:0016020
	Dere02g2190	431	Pfam	COBRA-like protein	43	206	IPR006918	GO:0010215\|GO:0016020
	Dere02g2190	431	PANTHER	PROTEIN COBRA	8	423	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g2190	Dere-ChrDere02	22483836	22485754	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g2190	1	430	COBRA Gene Family	AT3G29810	64.560	0.0	619