Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2189 ATGGGCTTCTGTTTGATACCCACAATTCGATCCCTCTCCTTAGCGAGTTCCGGCATTCTATTTTTGTTTCTACTCACCTTCACTTGCTTCACTTCTACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATCATAAGTTGGACTCCTGATGGTTACGTTGCTGTGGTTACTATGAACAATTTCCAACAATATCGTCATATCGCAGCACCAGGGTGGACTCTGGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATGGGAGGACAGACAACTGAACAAGGGGATTGTTCAAAATTTAAAGGAAACGTCCCACATTGCTGTAAGAAGGACCCAACAGTTGTAGATTTACTTCCAGGAACACCTTACAATCAGCAAATTGCAAATTGTTGCAAAGGTGGGGTACTCAGCTCATGGGCACAGGATCCAATCAATGCGGTTGCTGCATTTCAGGTAAGTGTTGGGAGAGCTGGAACCACTAATAGGACAGTCAAGGTGCCCAAAAACTTCACCCTGAAAGCACCAGGACCTGGATATACTTGTGGGCCAGCAAAAATTGTGAAACCCACTCAATTCATACAAGCAGACAAAAGGAGAGTTACACAAGCACTCATGACATGGAATGTGACATGTACGTATTCACAATTTCTAGCTCAGAAAACACCCACTTGCTGTGTCTCCCTCTCTTCTTTCTATAATGATACTGTTGTACCCTGCCCAACATGTTCATGTGGCTGCCAGAGCAACTCATCTAGCTGTGTAGAGGGAGATTCACCACATCTGGCATCAGTTGTTTCTGGTGCTGGAAAGAACAGCTTGACACCTTTGGTTAAATGTACTAGTCATATGTGCCCCATCCGAGTCCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTTAAGGTTACTGTTACCAATTTTAATTATAGGATGAATTATTCTGAGTGGAACCTGGTAGTTCAACACCCGAACTTTGACAATGTGACCCAACTTTTCAGTTTCAACTACAAGTCGCTAACACCGTATGGGGCAATAAATGATACTGCAATGCTTTGGGGACTTAAGTTCTACAATGATTTTCTTAACGAAGCTGGCCCTACTGGTAATGTACAGTCAGAGTTACTTTTTCAAAAGGATAAATCAACTTTCACCTTCGAGAAGGGTTGGGCTTTTCCTCGGAGGATCTATTTCAATGGTGACAATTGTGTGATGCCACCACCAGATGCTTACCCGTGGTTGCCTAATGCTGGTTCCCGGCAAGATGTTTCCCTGCTCGCTTTAATGATGTCTTGCTTGGTAGCCTTGGTCATTAATGCATTTATTTGA 1356 0.4344 MGFCLIPTIRSLSLASSGILFLFLLTFTCFTSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPINAVAAFQVSVGRAGTTNRTVKVPKNFTLKAPGPGYTCGPAKIVKPTQFIQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVPCPTCSCGCQSNSSSCVEGDSPHLASVVSGAGKNSLTPLVKCTSHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSEWNLVVQHPNFDNVTQLFSFNYKSLTPYGAINDTAMLWGLKFYNDFLNEAGPTGNVQSELLFQKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQDVSLLALMMSCLVALVINAFI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2189 451 PIRSF COBRA 9 451 IPR006918 GO:0010215|GO:0016020
Dere02g2189 451 PANTHER PROTEIN COBRA 23 441 IPR006918 GO:0010215|GO:0016020
Dere02g2189 451 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2189 Dere-ChrDere02 22479966 22483178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2189 1 449 COBRA Gene Family AT3G02210 73.451 0.0 711