Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2187 ATGTTAGATCCGAAGGACTCAATGGCGGCCTCCGATTCACGAGCCCACTCGTTCGGCCAGACTGAGATTAACTGGGACAAGCTAGATAAAACTAAGTTCTATGTTGTTGGAGCTGGACTCTTTACAGGTCTTACATTGGCTCTCTACCCAGTTTCAGTAGTGAAAACTAGACTGCAGGTTGCTTCAAAGGATACTGCAGAGAGAAATGCTTTTTCTGTTATAAAGGGATTACTTAAAACAGATGGCATTCCTGGTCTGTATAGAGGGTTTGGCACAGTTGTCACCGGTGCAATTCCTGCCAGAATCATATTCCTTACTGCACTAGAGACCACTAAGGTGGCTACCTTCAGGACGCTTGAACCATTTAGACTCTCTGAAACCACTCAGGCAGCCATAGCAAATGGAGTTGCAGGCTTGACATCATCACTCCTGTCTCAAGCTGTGTTTGTTCCAATTGATGTGGTTAGTCAAAAATTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGTGGTGGTCTGGATGTTGCTCGCAAGGTATTAAGATCAGATGGCATCCGGGGATTATATAAAGGATTTGGTCTGTCTGTTATGACTTATGCACCTTCTAGTGCTGTATGGTGGGCAAGTTATGGTTCTAGCCAACGCTTAATTTGGAGATTCTTGGGACATGGTGCTGAATATAGGGAAGGCAAACCTAGAGTGCAGGAGATTATGTTAGTTCAGGCTACTGGAGGAATAATTGCTGGTGCGACTGCTTCCTGCATTACAACACCATTGGATACTATTAAGACACGGTTACAGGTGATGGGACACGAGAAGAGAAGCTCTGTAAAACAAGTTGTCAAAGACTTAATAAATGAGGATGGTTGGAAAGGTTTATACAGAGGGTTAGGTCCAAGATTTTTCAGCATGTCAGCTTGGGGTACTTCAATGATATTGGCTTACGAATATCTGAAGCGCCTCTGCGCAAAAGATGAATAG 984 0.4411 MLDPKDSMAASDSRAHSFGQTEINWDKLDKTKFYVVGAGLFTGLTLALYPVSVVKTRLQVASKDTAERNAFSVIKGLLKTDGIPGLYRGFGTVVTGAIPARIIFLTALETTKVATFRTLEPFRLSETTQAAIANGVAGLTSSLLSQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYKGFGLSVMTYAPSSAVWWASYGSSQRLIWRFLGHGAEYREGKPRVQEIMLVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKRSSVKQVVKDLINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2187 327 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 326 - -
Dere02g2187 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 114 IPR018108 -
Dere02g2187 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 217 IPR018108 -
Dere02g2187 327 SUPERFAMILY Mitochondrial carrier 26 319 IPR023395 -
Dere02g2187 327 Gene3D Mitochondrial carrier domain 32 327 IPR023395 -
Dere02g2187 327 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Dere02g2187 327 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
Dere02g2187 327 PRINTS Mitochondrial carrier protein signature 46 60 IPR002067 GO:0055085
Dere02g2187 327 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Dere02g2187 327 FunFam Mitochondrial substrate carrier family protein 34 326 - -
Dere02g2187 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 322 IPR018108 -
Dere02g2187 327 Pfam Mitochondrial carrier protein 42 113 IPR018108 -
Dere02g2187 327 Pfam Mitochondrial carrier protein 132 218 IPR018108 -
Dere02g2187 327 Pfam Mitochondrial carrier protein 241 326 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2187 Dere-ChrDere02 22464523 22469137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2187 23 327 Chloroplast and Mitochondria Gene Families AT5G15640 75.896 9.52e-174 483