Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2183 ATGTCCAGAAAGGCATTAAAATCAATGAAGGATGAGAACTCAGATTTGCAGAAGCAGATTGGGTGCATCAATGGATTATTTCAGCTCTTTGACCGCCATCGTTTCCTAACAGGTGGAAGCAATGATAACATCAAAGAGCATGATACTACAAGGCAGAAAGCAAAGGCAAAAAATCTTAAGGTTGCGAGAGAGAAGCAGCAATTCTCCACAGAATCATCAATAACTTCTATGTCTTCATCGTCCTGTTCTAGCATGTCATCCATTGAGTTTAGTAGAACAGTTCAGGTAGAACCACCATCAATTCATCAAGTAAACTATCCAGACATCCACAGTTCAGGAGCAGCACCGAAGCAACTTGAAACCCCAGGCCAGCAATCCCTTGATTTTCGTGAAAATGTCAAACACTTGGGGCATAGAGAAGCCCGAGGATTATCAGTGAAAACTGTGGCTAAAGAAGGAAAGAAGGGAGGTCATACTTTGAAATACATAGACTCGCCCAGGCCTTTTCAGGCCTCCAAATCTGTCAATACAGGAGTTATGGTGGCCCAAGAACCTTTCCATGTCCCTGCAAAGTCCCAAAGAACACCGTGGGATTTGCCGCGACTCTCTTATGATGGAAGGGATATACAAGATACATTCAAATCCACTGTGAGACATAAGGAGCTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCATAAAAAGTTTGAATGAAGGAACAAAATATCGCAATTTTTTAAGGAGTCCACATAAAGGGTATGCGAGCTCCAACACAATGGTCAACCAGTTGCAAGAGCCAGAATCCTCCCGAAGACAATCCAGTGTTGTAGCGAAGTTAATGGGATTGGAAACCTTCCCAGACTGCACACAAACTAGTGAGCCTTCGCTGGAGACTGCAAACTGCCCCACCAATAAAAGGGAGCTTTCATCAAGATTGAGCACAAGTGATGAACGTAAGCAACAGCGAAGTTCTGGATCCCCAAGAAAATGCAAGGGGTCCAACTTGCTCCAGTCTGGAAGGGCTGATTCAACCATGAATGGCACACCATATTCGCAATCCTCACTAGAACCAACTCCATGGAGGCAACCTGATGCAAGCCAAGTGTCTCAATTTCCAGCCTTGAAGGGAGTGGAATCTCCAATAAAGGCCTCAAATTCTTCCCACTCTGTATATGGGGAAATTGAGAAAAGGCTGGCAGAACTTGAGTTTAAAAAGTCAGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCCATGCAGAGATACAAAGATTCATTAGATATTACAAGAGATCAAGCTTCAAATTGTCCATCTGACAACAGGAATAACAGCAGTCCCAGTGAAAGCTCAAGAGTACAAAGCCCAAGAAACCAACAAACGGACCCAATATCTGTCTCAGTTGATAGGCCAAATTCACACCAGGGGAGTAAATTGCCAATTGTTATCATGAAACCAGCAAAAGTTAGAAGAAAAACCAATAGCCCAGCTTCCTCAGATATGATGATTCATGGTAAATCATGCCCCAGCAAGCTTCTCCCTGGTAATCCCAGAAGTGGAAGATTGGTTGACAAGCAAACAGCTAAATCTATCATTCCTCCAACAATTAGACATCTTAATGATCCTTTTAGTCAACCCCCTCATTCAGCAGACACGAGTGATAAGATGAGAACTTCAAAATTGATCGAAGCCCCCAAAGTTCCACAAGACACCAGTGGTGAAAACATCAGCTCTAGCAATAAAACAGGGACAGAGAGCCCAAGACAGCACAAGAAGTTTGGTTTGGAGAGGCGTTCTCTCCCAACACCATGTTCCAGCAGTAACAGAAGACGAAACAATAGGCAGTCTATAGAATTATCCTCCCCAAGCACAACACCCAGACCAAAATTCTCTAATTTTCAAGAAGCAAATGAACGCTTCAGCAAGACCATTGGTCCTAGAAAAAATTTCAACAACAATGTTGATGCCAGTTCTCCAGATTTGGACAGGAATAAAAGCTCAGCGATTCAGTGCAACATCAAAGTCATTCACACTGATCAACCTGAAAAGATTAGCAGCACCTCTTTCGTGCTGCATGGCCTGAATCAAAATGATGCAACTAAAGTGCTGAGCAAGGAAAGCTCTATGGCTGAAGTAGTACTTATTGCAGAACAACCAAGTCCTGTCTCAGTTCTCGATGCTGCATTCTATAGAGATGACCCGCCATCTCCAATAAAAAAGAAATCATACATCTCTAAAGATTCAGATGAAGCTCAAAATGCTGATGACTATGAGGAGGAGAGCTCAGCAGATCTTACCAGCACCACAAAAGTCAATATCAGTGATAGGGCCAGTGATGAAGACTTAAACAGTCAGAATTTGGCTCAAAAAGTTCAAGAACTTGACTGCACTCATGATAAAACCGTCAATTTCAATGATACACTCTGTAACAGTAAAGATCCTGACCATAATTACATATCAGAAATACTGCTTGCATCAGGTCTGCTCAGTGGACATGGCTCTAGCCAGACATTTCAATCATCACCCCACCTGAATAGTAAAAAGCTGTTCCTTGCACTAGAACAAATCAAGACAAAGAAGAGGCTTAGCAACATTGAAGACAGTGCCAAGACAAATGAGCAAATGCAAAGAAAACTCATATTTGATGTCGTTCATGATATTCTAGTTCAAAAACTGATATTTGAGAGTTCTCCCAGTCAGTGGTTCCTTCCAAATGAGTTGACAGGTAGAAAATTGAGGGGGCAACAGCTTCTGTGTGAAATTTGCTCAGAATTTGACAAGTTGCAACGCCAAAGTAAGAATGCCAGCCTGACTAATGAGGATGAGAATTTGACGAGTCTCGTATGGGGAGATTTGATGCATCAACCCACAATTTGGAGAAACAACTACTGTGAGATCCCAGATATTGTGTTAGATATTGAACGGTTGATCTTTAAAGATTTAATAACTGAAGTTGTGAGGGGTGAAGTAGTTAATCATCCTGGTAAGCATTGCAGGCAACTGCTGTTTCCCAAATAG 3021 0.4237 MSRKALKSMKDENSDLQKQIGCINGLFQLFDRHRFLTGGSNDNIKEHDTTRQKAKAKNLKVAREKQQFSTESSITSMSSSSCSSMSSIEFSRTVQVEPPSIHQVNYPDIHSSGAAPKQLETPGQQSLDFRENVKHLGHREARGLSVKTVAKEGKKGGHTLKYIDSPRPFQASKSVNTGVMVAQEPFHVPAKSQRTPWDLPRLSYDGRDIQDTFKSTVRHKELPRLSLDSREGSIKSLNEGTKYRNFLRSPHKGYASSNTMVNQLQEPESSRRQSSVVAKLMGLETFPDCTQTSEPSLETANCPTNKRELSSRLSTSDERKQQRSSGSPRKCKGSNLLQSGRADSTMNGTPYSQSSLEPTPWRQPDASQVSQFPALKGVESPIKASNSSHSVYGEIEKRLAELEFKKSGKDLRALKQILEAMQRYKDSLDITRDQASNCPSDNRNNSSPSESSRVQSPRNQQTDPISVSVDRPNSHQGSKLPIVIMKPAKVRRKTNSPASSDMMIHGKSCPSKLLPGNPRSGRLVDKQTAKSIIPPTIRHLNDPFSQPPHSADTSDKMRTSKLIEAPKVPQDTSGENISSSNKTGTESPRQHKKFGLERRSLPTPCSSSNRRRNNRQSIELSSPSTTPRPKFSNFQEANERFSKTIGPRKNFNNNVDASSPDLDRNKSSAIQCNIKVIHTDQPEKISSTSFVLHGLNQNDATKVLSKESSMAEVVLIAEQPSPVSVLDAAFYRDDPPSPIKKKSYISKDSDEAQNADDYEEESSADLTSTTKVNISDRASDEDLNSQNLAQKVQELDCTHDKTVNFNDTLCNSKDPDHNYISEILLASGLLSGHGSSQTFQSSPHLNSKKLFLALEQIKTKKRLSNIEDSAKTNEQMQRKLIFDVVHDILVQKLIFESSPSQWFLPNELTGRKLRGQQLLCEICSEFDKLQRQSKNASLTNEDENLTSLVWGDLMHQPTIWRNNYCEIPDIVLDIERLIFKDLITEVVRGEVVNHPGKHCRQLLFPK 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2183 1006 MobiDBLite consensus disorder prediction 311 325 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 65 81 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 765 784 - -
Dere02g2183 1006 Pfam Domain of unknown function (DUF4378) 816 985 IPR025486 -
Dere02g2183 1006 PANTHER LONGIFOLIA PROTEIN 1 1002 IPR033334 GO:0051513
Dere02g2183 1006 MobiDBLite consensus disorder prediction 430 664 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 571 585 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 287 366 - -
Dere02g2183 1006 Coils Coil 414 434 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 56 81 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 287 310 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 737 752 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 737 784 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 601 664 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 327 366 - -
Dere02g2183 1006 MobiDBLite consensus disorder prediction 431 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2183 Dere-ChrDere02 22432213 22437704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2183 127 1001 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 32.337 4.13e-85 292