Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2177 ATGATTAGGATTCCAAAAGAATCAGATTTTCCAAGAAAACAGGAAGCTGATCATAATTCAAGTGATCATGAGAAAGCAAAGGCATCGTCATCGACCGCCAGCATCAAACCACAATGGGTGAGGTTGAAGGATCCGAGGATAGTGAGGGTGGCAAGAGCCTATGGAGGGAAAGACAGGCATAGCAAGGTTTGCACGATACGAGGATTGAGAGACAGGAGAGTGAGGCTGTCGGTACCGACAGCTATTCAATTATATGATCTTCAAGAAAGGCTAGGGTTTAATCAACCTAGTAAGGTCATTGATTGGCTTCTTGATGCTGCAAAGCATGAAATTGATGAACTCCCTCCTCTTCCCCCACTAAACTTGGCCCTCATTCATCATCGTGCTATTCTTACCTCTAATTCTCAGCCTAATGAAGAAGATGGGTGGGAAGCTTCCAATAACACTTTCTGGAAATTAATAGAGCCAAAAGAAGCTTCATCATCAGGAGAAATGGTTGCTCATGATCATGAGGAGCAAGCAAATGATGATGAGGTTAAACAAGGAAGCAATATTAATACTAATGAATTATATCATGGTGTGCAAGTTATGCCACATCATCATCCCCCCTTTCTTGGGTACCAATGGGAGGGTTCAGGTGGTGGTGGAGAAGGCGTAAATGTTTCTCATCAGACAGATTTGCAAGGCCTCAATGTCGTACCTTTCTCGTCAACCTTGTCTTTGTCCACAGGGGATTCTTCTCATTTTCCTTCACATTTTGGAGCAAGTATGGACATGGATAATATTCCAAGACAAATCAACAATACCCACTATCACTTGCTGGGCTCCAGTCCAAATCTATACCCTATCCCAATGGTACAATCCATGAAACCCTTTGGCCTGAGCATAATGACTCCCAACACCACAGAAAGCCAGTCTCATAACCAACAGGATTTTCCCTCCAAGTGA 948 0.4335 MIRIPKESDFPRKQEADHNSSDHEKAKASSSTASIKPQWVRLKDPRIVRVARAYGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQERLGFNQPSKVIDWLLDAAKHEIDELPPLPPLNLALIHHRAILTSNSQPNEEDGWEASNNTFWKLIEPKEASSSGEMVAHDHEEQANDDEVKQGSNINTNELYHGVQVMPHHHPPFLGYQWEGSGGGGEGVNVSHQTDLQGLNVVPFSSTLSLSTGDSSHFPSHFGASMDMDNIPRQINNTHYHLLGSSPNLYPIPMVQSMKPFGLSIMTPNTTESQSHNQQDFPSK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2177 315 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
Dere02g2177 315 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 181 IPR005333 GO:0003700
Dere02g2177 315 MobiDBLite consensus disorder prediction 1 25 - -
Dere02g2177 315 MobiDBLite consensus disorder prediction 1 35 - -
Dere02g2177 315 Pfam TCP family transcription factor 56 172 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2177 Dere-ChrDere02 22369686 22370633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2177 12 195 TCP Transcription Factor Family AT3G02150 46.193 5.72e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere02g2177 TCP 4.6e-28 No_clan