Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2175 ATGGCCGAACAGGACGTGAAGGTTGTGGAGGTTTGCTCGGTGGCGCCACCGTCATCCGCCGCCACCCCGACGTCACTACCCCTCACCTTCTTCGACATAAGATGGCTGAGATTCCCACCCCTCGAGTGCCTCTTCTTCTACGAATACCCTCACCCACCATGCTCCTTCTTCCACTCTGTTCTTCCAAAACTCAAACACTGCTTCTCCCTCACTCTCCAACACTACCTTCCTCTTGCAGGCAACCTCACATGGCCCCACCACTCTCCCTATCCCATCCTCAATTTCGTCCCTGGCGACTCTGTCTCCTTCACCATTGCTCAATCCCAATCCAGCTTCACCCATCTGTCCAGTTCTGATCTCCGTGAAGCCTCAAAACTTCATCTTTTCACTCCCCATTTAACTGTTTCCCACGAGCATGCTTCTGCTCTAGCCCTTCAAGTTACTCTGTTTCCGAACTCTGGCTTTTCCATCGGAATCACCATACACCACGCAGCTATGGATGGCAAATCTGCAATTTCCGTTATGAAACTATGGGCTTACTTTTGCTCTACCACTAACCTCGAAGAATCAGCTTCTTTGACGGTCCCACAGGAATTAGTGCCCTTCTATGACAGAACAGTGATCAGAGACCCCATTGGGATATACGAGAGGTTCGTGAAGGAGGTTCTAAACGACGGCGGATCACCAAACAACAGAAGCCTAATGTTATGGAACTGGGATCACAAAGTACCATCGGAAGCAGTAAAAGGGACGTTCCAATTAACCTCGTCAGACATTGAAAACCTCAAGAAACACGTACGATCCTATTCCAAGCTCAAGAACAAGGGACATTTTTCGACATTTTCAGTGACATATGCCTACGTTGGACGTTGCTTGGTGAAGGCGGAGCAGACAAAATCCGAGAAAGTGAGCCTGACGTTCGCTGTGGAATGCAGGGGTCGTTTGGACCCTCCAATTTCAGCTTCATATTTTGGGAATTGCCTTGTGGGACAGAGTGCTATAGCAGAGACCAGGAGATTGCTAGAGAAGGAAGGGTTGATTTGTGCTGTGGAGGCAGTGAGTGAAGCCATGATTAGACTGGAAATGGGATTGTGCGGAGGAGCAGATAGCTGGGCTTCTAGAAAGCAAATGGTAAAAAGTGGGAATAGTGAAAGAGTACTTAGCGTTTCTGGGTCACCTCGATTTGAGATTTACAGTGTTGATTTTGGGTGGGGAAGGCCATTGAAGGTGGATATCGTTTCTATAGACAAAACGCGAGCTTTTTCTATTGCAGAGAGCAGGAATGGTGATGGAGGAGTAGAGATTGGATTGGTGTTGAACAGATCTGAAATGGAAGCTTTTGGTGATGTTTTTTGTAAGGATCTTGAATCCGTTGTGTGCCCAGAAACTCCACTATCCCAGGGAAATTAG 1410 0.4794 MAEQDVKVVEVCSVAPPSSAATPTSLPLTFFDIRWLRFPPLECLFFYEYPHPPCSFFHSVLPKLKHCFSLTLQHYLPLAGNLTWPHHSPYPILNFVPGDSVSFTIAQSQSSFTHLSSSDLREASKLHLFTPHLTVSHEHASALALQVTLFPNSGFSIGITIHHAAMDGKSAISVMKLWAYFCSTTNLEESASLTVPQELVPFYDRTVIRDPIGIYERFVKEVLNDGGSPNNRSLMLWNWDHKVPSEAVKGTFQLTSSDIENLKKHVRSYSKLKNKGHFSTFSVTYAYVGRCLVKAEQTKSEKVSLTFAVECRGRLDPPISASYFGNCLVGQSAIAETRRLLEKEGLICAVEAVSEAMIRLEMGLCGGADSWASRKQMVKSGNSERVLSVSGSPRFEIYSVDFGWGRPLKVDIVSIDKTRAFSIAESRNGDGGVEIGLVLNRSEMEAFGDVFCKDLESVVCPETPLSQGN 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2175 469 Gene3D - 243 459 IPR023213 -
Dere02g2175 469 PANTHER - 6 456 - -
Dere02g2175 469 Gene3D - 2 227 IPR023213 -
Dere02g2175 469 Pfam Transferase family 17 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2175 Dere-ChrDere02 22345457 22346866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2175 44 447 Monolignol Biosynthesis Gene Families AT5G48930 24.163 2.29e-19 88.2