Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2168 ATGGAGAAAAGACAGATCTTTGTTCATGTGGTGGTTGTAGTGTTGATGGTGATGCTGAGAGCAAGTCAGGAAGCAGAAGGAGTAGGAGAAGAAGAAGCTGCAGATAGGATTGTGGAACTCCCAGGGCAACCCAGAGTCTCGTTTCAGCAATTCTCTGGCTACGTTACTGTTAATAGAGTTGCTGGCAGAGCCCTCTTTTACTGGCTCACTGAAGCTTCACAAAACCCCTTCGCCAAACCCCTAGTCATTTGGCTCAATGGAGGTCCGGGCTGTTCATCGGTGGCATATGGAGCATCCGAGGAGATTGGTCCCTTTAGAATAAACAGAACTGCTTCAGGGCTATACCTTAACAAGTTCTCATGGAACTCCATCGCCAACCTCCTCTTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTACTCCAACCGCTCCTCCGACCTCCTGAACACCGGCGACCGCCGCACTGCCAGAGACTCTTTGGAATTCATAATCAGATGGCTAGAACGATTCCCACGATATAAGAATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGCCATTATGTCCCTCAACTAGCTAAAGAAATCATGATGTACAACACAAAAGCGAAGCACCCCATCAATATGAAAGGAATTATGGTTGGGAATGCAGTGACGGACAACTACTATGATAACTTGGGTACGGTGACGTATTGGTGGAGCCACGCCATGATCTCCGATCAGACTTACCGGCAGCTCATGAGCACGTGCGACTTTCACCGGCAGAAGGAATCCGATGAGTGTGAGTCCTTGTATAGTTATGCCATGGACCAAGAATTTGGAAACATTGATCAGTACAACATCTATGCACCTCCGTGCAACAACTCCGATGGCAGCTCCGCCACCTCCCACCGCTCCATGCGGTTGCCCCACCGCCCTCATCATCCGATAATTAGGCAAATGTCTGGATATGATCCCTGTACGGAGAAGTATGCTGAGATATACTACAATAGAGCAGATGTTCAGAAAGCACTCCATGCTAACACAACCGGCATTCCTTACAAGTGGACAGCTTGCAGTGAGGTCTTGAATCGAAACTGGAATGATACAGATGTATCCATACTTCCAATTTATAGAGAGTTGATAGCACATGGAATCAGAGTTTGGGTTTTCAGTGGGGATGTTGATTCAGTGGTGCCAGTTACAGCAACAAGGTATTCCCTTGCACAGCTGAAGTTGGCAACCAAAATCCCATGGTATCCTTGGTACGTGAAGAATCAGGTTGGAGGGTGGACAGAGGTATATGAAGGGCTTACGTTCGCAACAGTGAGAGGAGCAGGTCATGAAGTGCCACTATTCAAGCCCAGAGCAGCTCTCAAGTTATTCAAATCATTCATTGCAGGCCAACCTCTTCCAAAGCAAGTCAATGTACCGTACAGTCAGTTTGATTGTTTGACTTTTAAGCGCGTTCTGCTTCTTGGTTTATCACCAATTTCTGAACACTTCAACAAGCTCAAGCCTTATATCCTGGGGGATAAACGGCTTCTCTTCCACGTATTCAGTTCTGGGTTTTAA 1557 0.4753 MEKRQIFVHVVVVVLMVMLRASQEAEGVGEEEAADRIVELPGQPRVSFQQFSGYVTVNRVAGRALFYWLTEASQNPFAKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNSIANLLFLEAPAGVGFSYSNRSSDLLNTGDRRTARDSLEFIIRWLERFPRYKNRELYISGESYAGHYVPQLAKEIMMYNTKAKHPINMKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSATSHRSMRLPHRPHHPIIRQMSGYDPCTEKYAEIYYNRADVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSILPIYRELIAHGIRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKNQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALKLFKSFIAGQPLPKQVNVPYSQFDCLTFKRVLLLGLSPISEHFNKLKPYILGDKRLLFHVFSSGF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2168 518 Gene3D - 321 358 - -
Dere02g2168 518 Pfam Serine carboxypeptidase 42 461 IPR001563 GO:0004185|GO:0006508
Dere02g2168 518 Gene3D - 368 462 - -
Dere02g2168 518 Gene3D alpha/beta hydrolase 32 289 IPR029058 -
Dere02g2168 518 SUPERFAMILY alpha/beta-Hydrolases 33 466 IPR029058 -
Dere02g2168 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Dere02g2168 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Dere02g2168 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Dere02g2168 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Dere02g2168 518 FunFam Carboxypeptidase 317 465 - -
Dere02g2168 518 ProSitePatterns Serine carboxypeptidases, histidine active site. 432 449 IPR033124 GO:0004185
Dere02g2168 518 FunFam Carboxypeptidase 31 289 - -
Dere02g2168 518 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 449 IPR001563 GO:0004185|GO:0006508
Dere02g2168 518 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Dere02g2168 518 FunFam Carboxypeptidase 368 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2168 Dere-ChrDere02 22269922 22275887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2168 326 465 Calmodulin-binding Proteins AT2G22960 32.624 5.84e-17 77.4