Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2126 ATGGCGGCCAACAACGGCGGATCCGCGACGGCGCCGCCACCCCGTCCGAGGATTACTCTCCCACCACGGCCTTCTATGGAGGCCTTCTTCACCGCTGGACTGGGCGCAAGCCCTGGCCCCATGACTCTCGTCTCCAACTTCTTCTCCGACAATTACCCTGACTCCGATTGTCGGTCCTTCTCTCAGTTGCTCGCCGGAGCTATGGCTTCTCCGCTCGCTCTCGGTGCGAGGCCTAGCTTTTTCCTGGACAATTCGACCGATAATTCCTCCAAAGAAGCTGTTGCTGAGGATGGAGCCCAGAAGAATTTGGGGTTCAAGCAGAGTAGACCTATGAATCTGGTGATTGCTCGTTCACCATTATTTACTGTTCCACCTGGATTAAGCCCTTCTGGGTTGCTTAACTCTCCGGGCTTCTTTCCGCCGCAGAGCCCCTTTGGGATGTCCCACCAGCAGGCTTTGGCACAGGTTACAGCTCAAGCTGTCTTGGCACAATCTCATATTCACATGCAAGGTGATCATCAACAATCTGTAGTTACAGCTCCTGGCGAGCCGTTGGTACAACAGCCATCTTTTGTTCCAAGTGAAGCTTCAGAGCAGCAAGTGGCACCATGTGCATCAGATTCTATAAGTGCCCAAATGGAGACATCAGATATTTCTCACGCTGATAAGAAATATCAACCAACTTCCTTGGCCGTTGATAAACCTGCAGATGATGGTTACAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTGAGTATCCACGAAGCTACTACAAGTGTACACATCTGAATTGCCTGGTAAAGAAAAAGGTTGAGCGTGCCCCTGATGGTCACATAACCGAAATTATTTATAAAGGTCAGCATAATCATGAGGTGCCTCAGCCAAACAAGCGAATTAAAGATAATTCTGATTTTAATGGAAATACAAATGTTCAAGTTAACTATGACCCAACTACCCAAGGTTGGGTTGGAAATTTAAACAAGTTTGGTGAAAGCATGCCAGATCATCCAGTGCCCGAGAATGATCTGACATCCAATCAAGGCACTCACAGACAAATACCTGGATCAAGTGAGAGTGAGGAAGCAGGTGATGCAGATATAAGGGAAGAGGACGGAGATGTCAGTGAACCAAATCCTAAGAGAAGGAACACTGATCTTGGGACTTCTGAAGTACCTACATCTCACAAGACTGTCACTGAACCCAAAATTATTGTGCAAACAAGAAGTGAAGTTGATCTTCTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAGGGAAATCCTCATCCCAGGAGTTATTACAAATGCACCACTGCAGGATGCAATGTGCGTAAGCATGTTGAAAGAGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAGGGAAAACATAACCATGATGTACCTGCTGCTAGAACCAGCAGCCACAACACAGCTACTAGCAATTCAATGCCAGTAAAACCACATAAAGTGGTATCTGAAAAGAATCCTTTGCTCAAAGATATGGATTTTGGAAATAATGACCAAAGACCGGTTGCTTTACGCCTGAAAGAAGAGCAAATCATTGTATAG 1593 0.4683 MAANNGGSATAPPPRPRITLPPRPSMEAFFTAGLGASPGPMTLVSNFFSDNYPDSDCRSFSQLLAGAMASPLALGARPSFFLDNSTDNSSKEAVAEDGAQKNLGFKQSRPMNLVIARSPLFTVPPGLSPSGLLNSPGFFPPQSPFGMSHQQALAQVTAQAVLAQSHIHMQGDHQQSVVTAPGEPLVQQPSFVPSEASEQQVAPCASDSISAQMETSDISHADKKYQPTSLAVDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERAPDGHITEIIYKGQHNHEVPQPNKRIKDNSDFNGNTNVQVNYDPTTQGWVGNLNKFGESMPDHPVPENDLTSNQGTHRQIPGSSESEEAGDADIREEDGDVSEPNPKRRNTDLGTSEVPTSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTTAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARTSSHNTATSNSMPVKPHKVVSEKNPLLKDMDFGNNDQRPVALRLKEEQIIV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2126 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 490 IPR044810 GO:0003700
Dere02g2126 530 Gene3D WRKY domain 401 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 Gene3D WRKY domain 223 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 FunFam WRKY transcription factor 33 403 469 - -
Dere02g2126 530 MobiDBLite consensus disorder prediction 301 328 - -
Dere02g2126 530 MobiDBLite consensus disorder prediction 473 497 - -
Dere02g2126 530 Pfam WRKY DNA -binding domain 417 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 MobiDBLite consensus disorder prediction 341 358 - -
Dere02g2126 530 ProSiteProfiles WRKY domain profile. 231 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 MobiDBLite consensus disorder prediction 1 24 - -
Dere02g2126 530 MobiDBLite consensus disorder prediction 383 398 - -
Dere02g2126 530 MobiDBLite consensus disorder prediction 291 398 - -
Dere02g2126 530 SUPERFAMILY WRKY DNA-binding domain 234 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 MobiDBLite consensus disorder prediction 478 494 - -
Dere02g2126 530 SUPERFAMILY WRKY DNA-binding domain 408 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 SMART WRKY_cls 416 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 SMART WRKY_cls 236 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2126 530 FunFam WRKY transcription factor 224 296 - -
Dere02g2126 530 ProSiteProfiles WRKY domain profile. 411 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2126 Dere-ChrDere02 21895462 21899498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2126 15 528 WRKY Transcription Factor Family AT2G03340 53.383 4.59e-155 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g2126 WRKY 1.4e-25 CL0274