Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2110 ATGGGGAGATCCTTGGAAGTCAAAACAGGTAAGTGGTCTAAAGAAGAAGATGATCTTCTAAAGGCCTGTGTTCACAAGTTTGGAGAAGGAAAATGGCACCTTGTTCGTCAAAGAGCTGTTAGTGATGATAATAATAATAAGAGTAATCATACAAGCAGTGGCGCAAGCGAGAAGACACAACAGGTAGATGAGGATTCTTCCATGGAGTGGTGGAAAAGTTTGCTTCACGGCAATGACATTGAGAAACAAGGCCAAGAATTAAATGGCTCGTCGTCGTTTTCATCATCTATGACTGAGCAAGATGGGACGCTTGACCTGTTCTGGGACGAGGAACTTACTCGGATTAATGACTTTCCTCTACTCATTAGTCTCTTGGATTCTCTCTCTTAA 390 0.4231 MGRSLEVKTGKWSKEEDDLLKACVHKFGEGKWHLVRQRAVSDDNNNKSNHTSSGASEKTQQVDEDSSMEWWKSLLHGNDIEKQGQELNGSSSFSSSMTEQDGTLDLFWDEELTRINDFPLLISLLDSLS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2110 129 CDD SANT 11 38 IPR001005 -
Dere02g2110 129 MobiDBLite consensus disorder prediction 38 67 - -
Dere02g2110 129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 38 IPR017930 -
Dere02g2110 129 SUPERFAMILY Homeodomain-like 7 39 IPR009057 -
Dere02g2110 129 MobiDBLite consensus disorder prediction 41 61 - -
Dere02g2110 129 Gene3D - 5 60 - -
Dere02g2110 129 ProSiteProfiles Myb-like domain profile. 4 75 IPR001005 -
Dere02g2110 129 Pfam Myb-like DNA-binding domain 9 38 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2110 Dere-ChrDere02 21760679 21761824 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2110 2 39 MYB Transcription Factor Family AT1G56650 52.632 2.50e-08 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere02g2110 Myb_DNA-binding 3.7e-07 CL0123