Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2099 ATGCTAAGTACCTCCTCATTCGCTTCCTTAAAGCGATCTCGGGATACAGTTACAACAGAGGATGTGGCTAAAGCTGTTGCTGCTGCTGTAACTGTTGTTCATTCACCAAGGCCGTCTATAATATTTTCATCTAAAGATGATAATGGTGGTGGCCAGCTTCAGAGATGTCGTGAAAAGCAGAGGAAGGAATCATCGCGACTGCAGACGGTAAATAGGAAGCTCACTGCCATGAACAAGTTGTTAATGGAAGAGAATGATCGATTGCAGAAGCAGGTCTCACATTTAGTTTATGAAAATAGATACATGAGACAACAAATACATATTGCATCTGCTACTACTATAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAGCACCAACAGCAAAACCCAACACCTCAGCATCCCCAGAGGGATGCCAATAACCCAGCTGGTCTTCTCGCAATAACTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGAAACTATTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTTTGGATTCTATTGGAATCATAGTTGTTTCCTGTAACTGTAGTGGAATAGCAGCACGAGCTTGTGGCCTTGTGAGTCTAAAGCCCATAAAGGTTGCCGAGATTCTTAAAGATCGTCCATCATGGTATCATAACTGTCGCTACCTTGATGTGTTGAGCATAGTCCCTGCTAAGAACGGGGGGACAATAGAGCTCATGTACATGCAGACTTATGCACCTACGACATTGGCAGCAGCACGTGACTTTTGGACTCTCAGATACACTACAAATTTAGAAGATGGAAGTCTTGTGATATGTGAGAGGTCATTGACATCTTCAACTGGTGGTCCCACAGGGCCTCCTGCGTCAAACTTTGTTAGAGCTGAAATGCTTCCTAGTGGTTATCTAATTAGACCCTGTGAGGGTGGCGGATCTATTATTCACATTGTTGATCATGTGTACTTAGATGTTTGGAGTGTTCCTGAAGTGCTCAGGCCCCTCTATGAATCATCAAAAATCCTAGCTCAGAAGACGACTATTGTTGCCTTGCGACATATAAGGCAAATTGCACAAGAAACAAGTGGAGAAATTCAATATGGTGGGGGCCGCCAGCCTGCTATTTTAAGGACATTTAGTCAGAGACTTAGCAGGGGGTTCAATGATGTTGTGAATAGGTTTGTGGGTGATGGTTGGTCACTGATGGGTAGTGATGGTGCTGAAGATGTGACCATAGCCATTAACTCATCTCCCAACAAATTTTTTGGGTCCCATTACAGTACCTCAATGTCCCCAGCGTTTGAAGGTGGGGTGTTGTGTGCCAAGGCATCAATGTGGCTATAG 1350 0.4474 MLSTSSFASLKRSRDTVTTEDVAKAVAAAVTVVHSPRPSIIFSSKDDNGGGQLQRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENRYMRQQIHIASATTIDNSCESVVMSGQHQQQNPTPQHPQRDANNPAGLLAITEETLAEFLSKATETIVDWVQMIGMKPGLDSIGIIVVSCNCSGIAARACGLVSLKPIKVAEILKDRPSWYHNCRYLDVLSIVPAKNGGTIELMYMQTYAPTTLAAARDFWTLRYTTNLEDGSLVICERSLTSSTGGPTGPPASNFVRAEMLPSGYLIRPCEGGGSIIHIVDHVYLDVWSVPEVLRPLYESSKILAQKTTIVALRHIRQIAQETSGEIQYGGGRQPAILRTFSQRLSRGFNDVVNRFVGDGWSLMGSDGAEDVTIAINSSPNKFFGSHYSTSMSPAFEGGVLCAKASMWL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2099 449 Coils Coil 71 91 - -
Dere02g2099 449 MobiDBLite consensus disorder prediction 121 143 - -
Dere02g2099 449 CDD bZIP 54 93 - -
Dere02g2099 449 MobiDBLite consensus disorder prediction 51 65 - -
Dere02g2099 449 SUPERFAMILY Bet v1-like 150 361 - -
Dere02g2099 449 ProSiteProfiles START domain profile. 140 341 IPR002913 GO:0008289
Dere02g2099 449 SMART START_1 149 359 IPR002913 GO:0008289
Dere02g2099 449 MobiDBLite consensus disorder prediction 121 140 - -
Dere02g2099 449 MobiDBLite consensus disorder prediction 41 65 - -
Dere02g2099 449 Gene3D - 186 366 IPR023393 -
Dere02g2099 449 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 52 449 IPR044830 GO:0003700
Dere02g2099 449 Pfam START domain 151 356 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2099 Dere-ChrDere02 21575284 21578095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2099 52 449 Homeobox Transcription Factor Family AT1G30490 77.694 0.0 645