Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2080 ATGGAAGCTAAGCAGAACGATCGGGAGGCCCTGAACGTACCCTTGCTGCTCGATGAAAAGCAACACCACCTAAATGGTAAAGAAAGACGAAGCGAAACTGCTGCTGACCAACGCATCAACGGCTCCACATCCTTATTCAAGACCTGTATCAATGGCCTCAATGCTTTATCAGGAGTCGGGATACTCTCCATTCCATATGCTCTAGCATCTGGAGGATGGCTAAGTTTAATTCTTCTGTTCACTATCGCCATGGCAACCTTTTACTCAGGTCTGTTGATTAAAAAATGTATGGATAAAAATTCAGATATCAAAACCTATCCAGACATAGGTGAACTTGCGTTTGGAAGGAAAGGAAGACTAGCAGTGTCAGTAACCATGTACGCTGAGCTCTACTTAGTTGCAACAGGATTCTTGATCATAGAAGGGGATAATTTAAACAATTTATTCCCCAATATAGCCATTGAATTTGCAGGTTTATCTGTTGGTGGAAAGCAATTCTTTGTGATACTGATAGGCCTTGTTATTATACCTTCAGTTTGGTTGGATGACTTGAGCCTTCTTTCTTATGTGTCTGCGGGCGGTGTGTTTGCTTCTGCTATCATCCTCTGCTCCTTATTCTGGACTGCAGCAGCAGATGGAGTTGGTTTTCACCAAAGTGGAACCCTTCTTAATTGGAATGGCATCCCCACAGCCGTTAGCTTGTATGCCTTCTGTTACTGTGCACATCCAGTCTTCCCCACCTTATACAACTCCATGAGAAACAAACATCAGTTCTCTAATGTGCTACTAATATGCTTTGTGTTAAGCACTATTGGGTATGCATCAATGGCTATCTTTGGTTACCTGATGTTTGGTTCAGATGTACAATCGCAGATAACATTAAACCTACCAACAGACAAGTTAAGCTCAAAAATTGCTATATATACTACTTTGGTGAATCCAATATCCAAGTATGCTTTAATGGTGACACCAATTACTAATGCTTTGAAAGAGTTGCTTCCTAGGCCGTACAAAAATAGACAGACAAATATCTTAATTAGCACGATCTTGGTAATCAGCACTGTCGTAGTTGCCCTAGCTATTCCTTTCTTTGGGTACCTCATGTCTCTGGTTGGTGCATTTCTGAGCGTCACAGCTTCAATTCTACTGCCATGCTTGTGCTACTTGAAGATTTCAGGCACCTATCGAAGATTTGAATTTGAAGGGGTAGTCATAGTGGGAATAATATTATTGGGTGTAGTGATGGGGACATTTGGAACTTACACGTCCCTCCTACAAATTATCGAGCAGTTGTAG 1296 0.4159 MEAKQNDREALNVPLLLDEKQHHLNGKERRSETAADQRINGSTSLFKTCINGLNALSGVGILSIPYALASGGWLSLILLFTIAMATFYSGLLIKKCMDKNSDIKTYPDIGELAFGRKGRLAVSVTMYAELYLVATGFLIIEGDNLNNLFPNIAIEFAGLSVGGKQFFVILIGLVIIPSVWLDDLSLLSYVSAGGVFASAIILCSLFWTAAADGVGFHQSGTLLNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLICFVLSTIGYASMAIFGYLMFGSDVQSQITLNLPTDKLSSKIAIYTTLVNPISKYALMVTPITNALKELLPRPYKNRQTNILISTILVISTVVVALAIPFFGYLMSLVGAFLSVTASILLPCLCYLKISGTYRRFEFEGVVIVGIILLGVVMGTFGTYTSLLQIIEQL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2080 431 Pfam Transmembrane amino acid transporter protein 42 421 IPR013057 -
Dere02g2080 431 PANTHER OS05G0424000 PROTEIN-RELATED 51 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2080 Dere-ChrDere02 21381100 21383386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2080 37 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 62.183 4.35e-176 496