Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2079 ATGGAGTTGGTTTTCACCAAAATGGAACCCTTCTTAATTGAAATGGCATCCCTACAGCCACTGGCTTGTATGCCTTCTGTTACTGTGCTACTAATATGCTTTGTGTTAAGCACTATTGGTTATGCATCGATGGCTATCTTTGGTTACCTGATGTTTGGTTTAGATGTACAATCACAGATAACATTAAACCTACCAACAAACAAGTTAAGCTTAAAAATTGCAATATATACTACTTTGGTGAATCCAACATCCAAGTACGCTTTAATGATGACACCAATTACTAATGCTTTGAAAGAGTTGCTTCCTTGTCTGTACAAAAATAGACTCATAAGTATCATAATTAGCACAATCTTGGTAATCAGCACTGTCATAGTTGCCCTAGCTCTTCCTTTCTTTGGGTACCTCATGTCTCTGGTTGGCGCATTTCTGAGTGTCACGGGTTCAATTTTACTGCCATGCTTGTGCTACTTGAAAATTTCAGGCACATACTGA 492 0.3821 MELVFTKMEPFLIEMASLQPLACMPSVTVLLICFVLSTIGYASMAIFGYLMFGLDVQSQITLNLPTNKLSLKIAIYTTLVNPTSKYALMMTPITNALKELLPCLYKNRLISIIISTILVISTVIVALALPFFGYLMSLVGAFLSVTGSILLPCLCYLKISGTY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2079 163 PANTHER OS05G0424000 PROTEIN-RELATED 28 160 - -
Dere02g2079 163 Pfam Transmembrane amino acid transporter protein 28 162 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2079 Dere-ChrDere02 21367400 21368034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2079 28 163 Amino Acid or Auxin Permease AAAP Family AT3G28960 64.234 1.73e-53 172