Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2072 ATGAGGCCCGCTCTAGCTAGCCAGGGTGAAGGAAACTTGGTTTGGCAAAGCAGGCCTATCATGTTCACGTTTTTAGGTCAAGAGCTATGGACAATTCTTATTGGCATCGTATCAGTGCACCCCACAAAACTGCCTTTTAATATCAAGTCAGGGGCCACTGTACGTTTCAGGATTAAATCCTGCTTAGCTGTTTCTGATTTCGAGCACTTAGATAATTTGAACCTAACATTTGCAGGCAGGGCTGGAACAGAGGGAAGTAGTAAGATGAGGAAGCGTCAAGTAGTGGTGAGGAGAGAGGAGCCTGCAAGGAGCACAAGCACTTCATCGTTCACGGTGAGGAGTGTGAGATATGGAGAGTGCCAAAAGAATCACGCAGCTAACGTCGGAGGATACGCCGTGGACGGTTGCCGGGAGTTCATGGCGAGCGGCGACGAAGGCACAGCCGCTGCTCTGACCTGTGCTGCCTGTGGTTGCCACAGGAACTTCCACAAACGAGAGATGGAGACAGAAGTAGTGTGTGAGTGTTCCTCACCTCCCTCCAATGGGACTTGA 552 0.5072 MRPALASQGEGNLVWQSRPIMFTFLGQELWTILIGIVSVHPTKLPFNIKSGATVRFRIKSCLAVSDFEHLDNLNLTFAGRAGTEGSSKMRKRQVVVRREEPARSTSTSSFTVRSVRYGECQKNHAANVGGYAVDGCREFMASGDEGTAAALTCAACGCHRNFHKREMETEVVCECSSPPSNGT 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2072 183 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 89 170 - -
Dere02g2072 183 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 117 166 IPR006456 -
Dere02g2072 183 Pfam ZF-HD protein dimerisation region 115 167 IPR006456 -
Dere02g2072 183 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 116 166 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2072 Dere-ChrDere02 21264658 21266637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2072 89 182 Zinc finger-homeobox gene family AT3G28917 75.758 3.51e-45 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dere02g2072 ZF-HD_dimer 8.4e-30 No_clan