Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2069 ATGGAAAACGAGGGGATTCGACAAGACGAAGACAGAGGAAGAGCTCATTATCACGGCTGGAAGATGGTGCAGCGGCTCACATATCGGAAGCGTCACAGCTATGCCACCAAATCCAACCAGCACAGGGTTGTCAAAACCCCTGGTGGAAAGTTGGTGTTTCAGAGCACAAAGAAGAGAGCAAGTGGACCAAAGTGCCCTGTTACTGGGAAGAGGATCCAAGGGATTCCACACTTGAGACCTGCTGAATACAAGAGGTCAAGATTGCCTAGGAACCGTCGAACAGTTAACCGGGCCTATGGAGGTGTATTATCTGGAGGAGCTGTTAGAGAAAGGATTATCCGTGCTTTCCTGGTTGAGGAGCAAAAGATTGTGAAGAAGGTATTGAAGATCCAGAAGGCAAAAGAAAAACAAGCATCAAAGAGTTAA 426 0.4742 MENEGIRQDEDRGRAHYHGWKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVFQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2069 141 ProSitePatterns Ribosomal protein L34e signature. 36 49 IPR018065 -
Dere02g2069 141 Gene3D - 60 141 - -
Dere02g2069 141 PANTHER 60S RIBOSOMAL PROTEIN L34 22 137 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere02g2069 141 PRINTS Ribosomal protein L34 signature 47 64 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere02g2069 141 PRINTS Ribosomal protein L34 signature 87 109 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere02g2069 141 PRINTS Ribosomal protein L34 signature 34 47 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere02g2069 141 PRINTS Ribosomal protein L34 signature 65 75 IPR008195 GO:0003735|GO:0005840|GO:0006412
Dere02g2069 141 Gene3D - 22 59 - -
Dere02g2069 141 Pfam Ribosomal protein L34e 22 117 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2069 Dere-ChrDere02 21220868 21222542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2069 22 140 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 89.916 1.35e-74 216