Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2051 ATGGAGGCTATGGCAAAATTGTCTAGTCCTTCTGGTCTAGAGTCTGAAGAGAAGAGAGCAACTTCCATTTGCCGTGAAGAAGATTGCTGCGTTCAAGAGAATGATGAACTCAAGTCTGCTAAAGATGAGATGGGTGGGGTGAAAGAAGAAAATGAAAGATTGAAGATGATGCTGGAGCGAGTTGAAAAAGATTACCAGTCTCTCCAACTGCGTTTCTTTGATGTCCTGCGTAGAGAGGCTTCTAAAAGAAGCGAAGTAGATTCAGCTACTTCCCCTGATGAAACTGAAGAGACTGAGCTCGTGTCGCTTTGCCTTGGAAGAAGTCCAAGGGACCCTAAAAAGGATGAAAGAAATGGAAACTTTGGAAAACCTAAAGAAAGAGAAGATCTGGAGGCCTGCCTTACCCTTGGATTAGACTCCAAAAGTGAGTTATCAATGGAAGTGGGGTCTGATCAAAGCCCAGTAAATAGCTCAGAAGAATCTAAGGAAGCAGAAGCTGGGGAAACATGGCCAGCAAGTAAATCACTCAAGGCAAAAAACGGAGATGATGAGATTTCGGAGCAGATACCTACCAAGAGAGCTAGGGTTTCTGTGAGAGCAAGATGTGACACTCCCACGATGAATGATGGATGTCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCATGTCCTCGGGCATACTATCGCTGCACAGTAGCACCATCATGCCCAGTCAGGAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATCTTAATCACTACATATGAAGGAACCCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCTACCACTTCCGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCTCAGCCTGCAGGTCATAGTTCTGCATCATTAGCAAATGCCCGTACACTACTTAATGGCCTGAACTTCGGTCATTTTGACCAATCAAGAGCAAAACAGATCTTCTTGCCCAATTCAGTCTCTCCTTTGTTCCCAACAATCACTCTTGATCTCGCTACTGCTACATCCTCTTCAACCCATGCCAATTCTCGTCCAACTTCAAACTTTGCTCTAAGCCCAAGAGTACCCCCAGCAAGTCTAAGCTTTTGCTCACCGGAGCCCAACATTCCACCAGCAATTTGGGGTAATGGAATCCTTAATAATGACAAAACCCATATAAGGTCAGTTAACAAGGGAAATCAATTTCAAGAGCAGTTCCATCAAAACTGCACGAAGAACCAGGCTCCTGCACGAGAGGCTTTAGCAGAAACTTTAACTAAAGCAATTAGTACAGATCCAAGTCTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGGGACAAGGATCCACCAATGTGAACCAGATGGGTGGAGCGGAGATGTCAGGTTTAGGGTTGAACTTGAAACTGAGAGAGCATTCTCAGTTTGCTTCTTCCAATCCTTTGACCCAGAATGAGAAAGGATGCTTGCCAGGTTACTTGAACAGATTGTCATCAAATTCTCATACTGGAAACTTCACGCTTCTCCAACCACCATTAACATATTCTATGTCTAAGAGAAGCGTGCCTCCTTCCATTAGTGATCAGATCAATCATTAA 1614 0.4442 MEAMAKLSSPSGLESEEKRATSICREEDCCVQENDELKSAKDEMGGVKEENERLKMMLERVEKDYQSLQLRFFDVLRREASKRSEVDSATSPDETEETELVSLCLGRSPRDPKKDERNGNFGKPKEREDLEACLTLGLDSKSELSMEVGSDQSPVNSSEESKEAEAGETWPASKSLKAKNGDDEISEQIPTKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPAGHSSASLANARTLLNGLNFGHFDQSRAKQIFLPNSVSPLFPTITLDLATATSSSTHANSRPTSNFALSPRVPPASLSFCSPEPNIPPAIWGNGILNNDKTHIRSVNKGNQFQEQFHQNCTKNQAPAREALAETLTKAISTDPSLRSVIAAAVSSIVGQGSTNVNQMGGAEMSGLGLNLKLREHSQFASSNPLTQNEKGCLPGYLNRLSSNSHTGNFTLLQPPLTYSMSKRSVPPSISDQINH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2051 537 Gene3D WRKY domain 192 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2051 537 MobiDBLite consensus disorder prediction 1 20 - -
Dere02g2051 537 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2051 537 Pfam WRKY DNA -binding domain 208 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2051 537 Coils Coil 30 71 - -
Dere02g2051 537 SUPERFAMILY WRKY DNA-binding domain 200 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g2051 537 MobiDBLite consensus disorder prediction 108 128 - -
Dere02g2051 537 MobiDBLite consensus disorder prediction 177 193 - -
Dere02g2051 537 FunFam probable WRKY transcription factor 31 192 269 - -
Dere02g2051 537 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 32 459 IPR044810 GO:0003700
Dere02g2051 537 MobiDBLite consensus disorder prediction 81 128 - -
Dere02g2051 537 MobiDBLite consensus disorder prediction 144 193 - -
Dere02g2051 537 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g2051 537 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2051 Dere-ChrDere02 21024508 21027147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2051 44 502 WRKY Transcription Factor Family AT5G15130 45.491 2.57e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g2051 WRKY 3.4e-24 CL0274