Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2022 ATGCCAAAGATACCTCTTTCACAAGTAGATAATTTGGGTGTTACGCGAGAGGAAAACACAATTGAGAATGTGAATGGAGGTACTTCGCTTGTTACTGGGCTAAAGAATGAAATGGGTGAATATAACTGCTTTCTTAGTGTTATAATACATGAGGAATTTCTTGGCATATCAAGATTAGGGCATGATCATGTGGGTAATCCTTGTGTTATCTGTGCATTGTATGAAATCTTTTTTGCTATGGACATTGCATCAAAAGATTGTAGGGGAGAAGCAATAGCACCTACCTTTCTGAGGATAGCTCTAAGCAACCTATGTCTAGATAGTAAGTTCTTCCAAGAGGTAATTTGTAGTGAAAGCTCCTTTGATGAGCTTTTGAATTTAATGGAGATGAATCACCAGTTGGCTTGTGATCCAAAAGCTGGCGGCTGTGGCAAGTTAAACCACATCCATCACTTTCATTTAAAACCACTTCATGTTTTTATGACAGGTGGCTCTATTTTTGCTTATGGAATGTTGAACTTATTTTGGAATCGTTCTTGTTCGATCATTGGTGGAGAAAAGCTTGTGACAGAGTTCTCAGCATTGTAG 588 0.3827 MPKIPLSQVDNLGVTREENTIENVNGGTSLVTGLKNEMGEYNCFLSVIIHEEFLGISRLGHDHVGNPCVICALYEIFFAMDIASKDCRGEAIAPTFLRIALSNLCLDSKFFQEVICSESSFDELLNLMEMNHQLACDPKAGGCGKLNHIHHFHLKPLHVFMTGGSIFAYGMLNLFWNRSCSIIGGEKLVTEFSAL 195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2022 195 PANTHER UBIQUITIN SPECIFIC PROTEINASE 23 113 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere02g2022 Dere-ChrDere02 20556611 20558825 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2022 113 195 C2H2 Transcription Factor Family AT3G47910 51.807 1.05e-20 87.4