Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2021 ATGTTCCCGCCAGGCAGTGTACGGAAATCTCACCGAGAAGAATTGTTCCTCCGTACGCTAGGTGCCAAATTGCAAATAGCATTTTTAATGAAGGACTGTGAGTGTAAATATCAAAGCTTGAGGAGTGCCCCTAGTTGGAATTCGAAAGTACCTCAACATTCGGTTCTGGTTGGGATGGCTGACAAAGACGAAGCCTTGAAGGCGGTGTTGAAGGAAGTTGTGGACTTGGAAAACGTACCGCTTGAGGAGGTTTTTCAGACACTGAGGTGTGATTCAAATGGGCTCACAACGGAGGCTTCTCAGGAGAGGTTGGCCATCTTTGGGTACAACAAACTCGAGGAGAAGCAGGAAAGCAAGGTTTTGAAGTTCTTAGGATTCATGTGGAATCCTCTCTCTTGGGTCATGGAAGCTGCAGCGATCATGGCCATTGCTTTGGCCAACGGAGGAGGAAAACCTCCTGATTGGCAAGACTTTGTTGGAATCATCACACTCCTTCTTATCAATTCGACAATAAGTTTTATAGAGGAGAACAATGCAGGCAATGCTGCTGCAGCTCTCATGGCTCGTCTTGCACCCAAAGCTAAGGTCCTTCGAGATGGGAAATGGGTTGAGGAGGATGCAAGTATTCTTGTTCCTGGTGACATAATTAGTGTCAAACTAGGAGACATAATTCCTGCTGATGCTCGACTCCTTGAGGGTGATCCATTGAAGATTGATCAGTCTGCTCTTACAGGTGAATCTCTTCCTGTGACGAAAGGACCAGGTGATAGTGTTTATTCAGGCTCTACATGCAAACAGGGGGAGATAGAAGCAGTTGTTATTGCCACAGGAGTTCATACCTTCTTTGGCAAGGCTGCTCATCTTGTGGATACAACTAATCAAGTGGGCCATTTTCAAAAGGTCTTGACTGCTATTGGAAATTTTTGTATATGTTCAATTGCGGTGGGAATGATAATAGAGATTATTGTCATGTACCCAATTCAACATCGAAAGTATCGTCCTGGAATTGACAATTTGCTGGTGCTTCTTATTGGAGGAATTCCCATAGCCATGCCTACTGTTTTGTCTGTGACGATGGCAATTGGATCACATCGCTTAGCTCAGCAGGGTGCTATTACTAAAAGAATGACAGCAATAGAAGAAATGGCAGGGATGGATGTATTGTGCAGTGATAAAACAGGAACCTTGACATTGAATAAGTTAACAGTTGACAAGAATCTTATTGAGGTTTTTGCGAAGGGAGTTGACATAGATACTGTTGTTCTCATGGCAGCTCGTGCCTCCAGAATGGAAAACCAAGATGCAATAGATGCTGCTATTGTAGGGATGCTGGGTGATCCAAAAGAGGCAAGGGCTGGTATTCAAGAGGTTCACTTCCTTCCGTTCAATCCAACTGATAAGCGGACAGCTCTGACTTACATAGACAGTGAAGGTAGAATGCATCGTGTCAGCAAAGGTGCACCAGAGCAGATTTTGAATCTCGCACACAATAAATCAGAGATAGAACGCAGAGTTCATTCTATCATTGATAAATTTGCAGAAAGAGGACTACGATCTCTTGCAGTTGCCTACCAGGAAGTTCCTGATGGAAGGAAAGATAGCCAAGGAGGGCCTTGGCAATTCATTGGCCTCATGCCTCTGTTTGATCCACCTAGACATGACAGTGCGGAGACAATACGAAGGGCATTGAATCTTGGAGTAAATGTTAAAATGATAACAGGTGATCAACTAGCAATAGGAAAGGAAACTGGACGCCGTCTGGGGATGGGAACCAACATGTACCCTTCATCAGCTTTATTGGGGCAAAACAAGGATGAAGCAATCGCTGCTTTGCCGGTTGATGAACTGATTGAAAAAGCTGATGGTTTTGCTGGTGTTTTCCCTGAGCACAAATATGAAATTGTGAAGCGTCTGCAAGCTAGGAAACATATATGTGGAATGACTGGTGATGGGGTTAATGATGCGCCAGCTCTTAAAAAGGCAGATATTGGAATAGCTGTTGCTGATGCAACTGATGCAGCTCGTAGTGCTTCTGACATTGTTCTGACCGAACCAGGTCTGAGTGTTATCATTAGTGCTGTACTGACCAGTCGGGCAATATTCCAGAGGATGAAGAATTACACGATCTATGCAGTCTCCATCACAATACGTATTGTGCTTGGTTTCATGTTATTGGCCCTCATATGGCAATTTGATTTTCCACCATTCATGGTGCTGATTATTGCTATCCTCAATGATGGTACCATTATGACAATATCAAAGGACAGAGTGAAACCGTCTCCACATCCAGATAGCTGGAAGCTGGCAGAGATATTTACTACCGGAATTATTCTTGGCGGTTATTTGGCTATGATGACGGTCATCTTCTTTTGGGCAGCATATAAAACAGATTTCTTCCCTCGTACATTTGGGGTCTCAAGCCTTCAGAAGAAGGATGAGGATGACTTTAGGAAGCTCGCCTCAGCGATATACCTACAAGTTAGTACCATTAGTCAGGCCCTCATATTTGTTACACGAGCCCGGAGCTGGTCTTTTGTTGAGCGTCCGGGTTTGTTACTCGTAGCAGCTTTCGTTATTGCCCAGCTGATAGCCACACTAATTGCTGTCTATGCAAATTGGAGTTTCGCTGCAATTGAAGGGATTGGATGGGGTTGGGCTGGTGTTGTTTGGCTTTATAACCTCATCTTCTATTTCCCACTTGATTTTATCAAATTCATAATTCGATATGCCTTAAGTGGCAGGGCTTGGGATCTTGTTATTGAACAAAGGATTGCCTTTACAAGGAAAAAGGATTTTGGAAAGGAAGAACGTGAACTCAGATGGGCACACGCACAGAGGACCCTTCATGGGCTTCACCCACCGGATACCAAGATGTTCAGTGAACGTACAAGTTATGCGGAGCTCAATCAGATGGCTGAAGAGGCCAAAAGACGAGCAGAGATCGCTAGACTTAGAGAACTTCATACACTAAAAGGCCATGTTGAGTCGGTGGTCAGACTGAAGGGTCTTGACATCGACACAATTCAGCAAGCATACACTGTCTAA 3045 0.4433 MFPPGSVRKSHREELFLRTLGAKLQIAFLMKDCECKYQSLRSAPSWNSKVPQHSVLVGMADKDEALKAVLKEVVDLENVPLEEVFQTLRCDSNGLTTEASQERLAIFGYNKLEEKQESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWVEEDASILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDIDTVVLMAARASRMENQDAIDAAIVGMLGDPKEARAGIQEVHFLPFNPTDKRTALTYIDSEGRMHRVSKGAPEQILNLAHNKSEIERRVHSIIDKFAERGLRSLAVAYQEVPDGRKDSQGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDEAIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPHPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPRTFGVSSLQKKDEDDFRKLASAIYLQVSTISQALIFVTRARSWSFVERPGLLLVAAFVIAQLIATLIAVYANWSFAAIEGIGWGWAGVVWLYNLIFYFPLDFIKFIIRYALSGRAWDLVIEQRIAFTRKKDFGKEERELRWAHAQRTLHGLHPPDTKMFSERTSYAELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2021 1014 PANTHER CALCIUM-TRANSPORTING ATPASE 77 947 - -
Dere02g2021 1014 FunFam ATPase 4 plasma membrane-type 633 879 - -
Dere02g2021 1014 SFLD C1.7: P-type atpase like 371 699 - -
Dere02g2021 1014 CDD P-type_ATPase_H 94 905 IPR006534 GO:0008553|GO:0016020|GO:0120029
Dere02g2021 1014 PRINTS P-type cation-transporting ATPase superfamily signature 389 403 - -
Dere02g2021 1014 PRINTS P-type cation-transporting ATPase superfamily signature 543 554 - -
Dere02g2021 1014 PRINTS P-type cation-transporting ATPase superfamily signature 239 253 - -
Dere02g2021 1014 PRINTS P-type cation-transporting ATPase superfamily signature 565 575 - -
Dere02g2021 1014 PRINTS P-type cation-transporting ATPase superfamily signature 671 683 - -
Dere02g2021 1014 PRINTS P-type cation-transporting ATPase superfamily signature 648 667 - -
Dere02g2021 1014 Gene3D - 154 879 - -
Dere02g2021 1014 Gene3D - 192 276 - -
Dere02g2021 1014 ProSitePatterns E1-E2 ATPases phosphorylation site. 391 397 IPR018303 -
Dere02g2021 1014 SUPERFAMILY HAD-like 385 695 IPR036412 -
Dere02g2021 1014 FunFam Plasma membrane ATPase 192 276 - -
Dere02g2021 1014 Pfam haloacid dehalogenase-like hydrolase 385 662 - -
Dere02g2021 1014 SMART Cation_ATPase_N_a_2 75 147 IPR004014 -
Dere02g2021 1014 FunFam Plasma membrane ATPase 542 696 - -
Dere02g2021 1014 Pfam Cation transporter/ATPase, N-terminus 78 141 IPR004014 -
Dere02g2021 1014 SUPERFAMILY Calcium ATPase, transduction domain A 192 289 IPR008250 -
Dere02g2021 1014 NCBIfam plasma-membrane proton-efflux P-type ATPase 94 870 IPR006534 GO:0008553|GO:0016020|GO:0120029
Dere02g2021 1014 Gene3D - 401 548 IPR023299 GO:0000166
Dere02g2021 1014 FunFam Plasma membrane ATPase 401 548 - -
Dere02g2021 1014 PRINTS H+-transporting ATPase (proton pump) signature 620 636 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 PRINTS H+-transporting ATPase (proton pump) signature 679 704 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 PRINTS H+-transporting ATPase (proton pump) signature 505 523 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 PRINTS H+-transporting ATPase (proton pump) signature 824 845 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 PRINTS H+-transporting ATPase (proton pump) signature 648 664 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 SUPERFAMILY Calcium ATPase, transmembrane domain M 75 911 IPR023298 -
Dere02g2021 1014 NCBIfam HAD-IC family P-type ATPase 623 737 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 NCBIfam HAD-IC family P-type ATPase 161 408 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g2021 1014 Gene3D - 386 685 IPR023214 -
Dere02g2021 1014 Pfam E1-E2 ATPase 190 369 - -
Dere02g2021 1014 SFLD p-type atpase 371 699 IPR044492 -
Dere02g2021 1014 Gene3D - 963 1014 - -
Dere02g2021 1014 Coils Coil 965 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2021 Dere-ChrDere02 20544704 20552529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2021 59 1014 Primary Pumps ATPases AT5G62670 89.958 0.0 1753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2021 02 20544704 20552529 Dere02g2021 02 20544704 20552529 ECH