Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2016 ATGGAGGAGAGAGAGACGAAGGAGACAATGGAGGGGAAAGATGAGATTGTTAGAACCCACAATCGTCTTCGTCGCAGGGGACAAATCGACGTGGTGTCTCTGTTGAGAAGGCGGCAAAGATACACGTTGACGATGTCGCCGGTGCTAATGAGACAAAGACGATGGAAGTCGTGGCTAGCTGGAAGATTAGAATCATGGAATATGGGAGGCACAAACAAGGCCTGTGCTGCTTGCAAGTATCAGAGAAGAAGATGTTCAAAGGAGTGCCCTCTGTCTCCCTATTTCCCAGCAGATCAACCTAAGAAGTTCAGCAACGCTCATCGGTTGTTTGGAGTCGCAAACATAATGAGAATTCTCAAACGGGTAGAGCCAAAACAGAGAGACGAAGCCATGAAATCCATTATTTTTGAATCTGATATGCGAGCCCAGTTTCCCGTTACGGGGTGTCTGGGCATTATATGGAACTACAATAATCAGATACTTCACGCCATGGAAGAGCTACGCTATCTCAAGATGAGGCTCGCCATTTATAAAGAACAATATAATTGCCATTATCATGTTTCTCATCAAATATCTCCTTCTCCATTAGAATGTTCGCAGTTTGAGGGAATACCTACTAGTAATGATACCTTCTCCGTTTATAACAATTTACAAGACAACAATAGCGCGGTTGGTGGTATGTTTGATGGTGGAAATGGAGCCTATGGTAGTAATTATATTGACGGTATTCAACAACCATTCAATCCCATCGCTGCACAATCATCGAATTTAATAGTAAATCTACGAGAATTGGATATTGCTGCTGATGACGACGAAATTCCTTTTGATGCCATAGTTGATGATAGGCAATCATTTATTGAATGCAGAGAACCATGCGAGTCAAGTGCGGAGTCATCGTTCAGAGATGCAAAACATCATATTGAGCATGGTTCGAAGAATGAGCTGAAAAGTGCAGCTGCATACTTCGGTCTAACGAGTGTGAAGGGATGA 990 0.4313 MEERETKETMEGKDEIVRTHNRLRRRGQIDVVSLLRRRQRYTLTMSPVLMRQRRWKSWLAGRLESWNMGGTNKACAACKYQRRRCSKECPLSPYFPADQPKKFSNAHRLFGVANIMRILKRVEPKQRDEAMKSIIFESDMRAQFPVTGCLGIIWNYNNQILHAMEELRYLKMRLAIYKEQYNCHYHVSHQISPSPLECSQFEGIPTSNDTFSVYNNLQDNNSAVGGMFDGGNGAYGSNYIDGIQQPFNPIAAQSSNLIVNLRELDIAADDDEIPFDAIVDDRQSFIECREPCESSAESSFRDAKHHIEHGSKNELKSAAAYFGLTSVKG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2016 329 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 71 200 - -
Dere02g2016 329 Pfam Lateral organ boundaries (LOB) domain 74 170 IPR004883 -
Dere02g2016 329 ProSiteProfiles LOB domain profile. 73 174 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2016 Dere-ChrDere02 20466728 20468830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2016 69 178 AS2 family AT3G47870 55.455 1.05e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere02g2016 LOB 1.4e-36 No_clan