Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2007 ATGGACGAGCCGCTCCATAATAATAGTGCCGAAAAGAACGACTCTGATTCTCTCAGTTGCACCCTACAGGACCCTTCCGTTAGCAAGACGAGCAATAATAGTAATGTTGACCCTCACAGGAGCACTGAATCCAACAGTTATGATGATAGTTACAAGAGTAGCTCCAGCTGTGTGAGTAATTATTCCAACAATAATGATGCTACTGATTCCAGTTGTAGGAGCTTTTGCCCTTCCAAGCCTCACAAGGGCAACGATATTCGATGGGAAACTATACAATTCGTGAGAGCAAAGTACGGAGATTTGGGGTTGGGGCATTTCAGGCTGTTGAAGAAGCTTGGTTTTGGGGACATTGGGAGTGTGTATTTGGCCGAGCTGAGAGGGATGGGTTGCCTCTTCGCAATGAAGGTCATGGATAAGGTCGCGTTGACCGCAAGGAAGAAGTTGGCTAGAGCTCAGACTGAGAGGGACATTCTGGGATCATTGGACCATCCTTTCCTTCCCACCCTTTATTCTCATTTCGAAACTGAGAAGTTCTCTTGCTTGCTTATGGAGTTTTGCAGTGGTGGTGATCTTCACGTGCTCCGGCAGCGCCAGCCAGGCAAGCATTTCACCGAGCAAGCTGCGAGGTTTTATGCTTCCGAAGTGCTTCTTGCTCTTGAGTATCTACACATGATGGGAGTAATATACAGGGACTTGAAGCCTGAGAATGTACTGGTTCGGGAGGATGGTCATATCATGCTCTCTGATTTTGATCTATCATTAAGATGTTGTGTGAGTCCTACCCTTGTTCGGTCCAACGAAGAACCATCTTGCCAAATTTCTTCCTACTGTGTCCAGCCATCGTCATGTATTGACCCATCCTGCAAGCTATCTGTTTGTGTGGAGCCTTCATGCTTGCAGTTGCAGCCCTCTTGCTTTACACCCCATATCTTCAACTCCAAAAAGGTTAAAACAAAGGGTGTTAAGCAAAGCTACGCAAACTCAGATGTATATCCTATGCTTATTGCCGAGCCAACCAGCGCTCGATCCATGTCATTTGTTGGGACTCATGAATATTTAGCCCCTGAGATTATAAGAGGCGATGGTCACGGAAGTGCTGTGGATTGGTGGACATTTGGAATTTTCTTGTATGAGTTGTTGCATGGGAAGACCCCATTTAAGGGGAATGGAAACCGAGAGACACTATTCAACGTTGTTGGTCAGCCTCTGAAATTTCCTGAGGGATCAAACATCAGTTTTGCTGCCAAGGATTTGATAAGGGGATTGCTTGTTAAAGACCCGAAGAAGAGGCTTGGGTTCAAACGAGGTGCCACTGAGATCAAACACCATCCTTTCTTTGAAACTGTTAATTGGGCTTTAATTCGTAGTAACCAGCCCCCACAGATTCCAAAACCACTTGATCTTGCAATTTTGAATGATACATTGAAGCCATCGGTGCCTCCTCATGACAAAGATGCCTCTGATCATCCACACAGCAGGTCTTCGGGTCCTTACTTGGATTTTGAATTCTTTTAA 1515 0.4561 MDEPLHNNSAEKNDSDSLSCTLQDPSVSKTSNNSNVDPHRSTESNSYDDSYKSSSSCVSNYSNNNDATDSSCRSFCPSKPHKGNDIRWETIQFVRAKYGDLGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKVALTARKKLARAQTERDILGSLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHVLRQRQPGKHFTEQAARFYASEVLLALEYLHMMGVIYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVRSNEEPSCQISSYCVQPSSCIDPSCKLSVCVEPSCLQLQPSCFTPHIFNSKKVKTKGVKQSYANSDVYPMLIAEPTSARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGKTPFKGNGNRETLFNVVGQPLKFPEGSNISFAAKDLIRGLLVKDPKKRLGFKRGATEIKHHPFFETVNWALIRSNQPPQIPKPLDLAILNDTLKPSVPPHDKDASDHPHSRSSGPYLDFEFF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2007 504 PANTHER FLIPPASE KINASE 1-RELATED 27 467 - -
Dere02g2007 504 SMART serkin_6 106 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2007 504 FunFam serine/threonine-protein kinase D6PK-like 341 464 - -
Dere02g2007 504 Gene3D Phosphorylase Kinase; domain 1 104 189 - -
Dere02g2007 504 ProSiteProfiles Protein kinase domain profile. 106 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2007 504 MobiDBLite consensus disorder prediction 1 51 - -
Dere02g2007 504 MobiDBLite consensus disorder prediction 11 51 - -
Dere02g2007 504 Gene3D Transferase(Phosphotransferase) domain 1 190 256 - -
Dere02g2007 504 SUPERFAMILY Protein kinase-like (PK-like) 82 473 IPR011009 -
Dere02g2007 504 FunFam serine/threonine-protein kinase D6PK-like 190 257 - -
Dere02g2007 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Dere02g2007 504 Gene3D Transferase(Phosphotransferase) domain 1 341 464 - -
Dere02g2007 504 CDD STKc_phototropin_like 105 469 - -
Dere02g2007 504 Pfam Protein kinase domain 343 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2007 504 Pfam Protein kinase domain 107 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2007 504 MobiDBLite consensus disorder prediction 477 496 - -
Dere02g2007 504 FunFam Serine/threonine-protein kinase D6PK-like 104 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2007 Dere-ChrDere02 20330796 20332536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2007 73 504 AGC Kinase Gene Family AT5G40030 78.060 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere02g2007 Pkinase 4e-37 CL0016