Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2000 ATGGCAAAATATTCGCTGGATCTCAGGAATTGCTTACTATTACTGCTCTGGAGCTCCGCGGGTTTCTGGGGTTTTGCTGCTTCGCAGGCTGAAGATGACGTGGAATGCCTCAAAGGCATCAAAGGCTCTTTCAGTGATCCTCAGGGGAAGCTTGCCTCTTGGCGTTTCGATAACAACACCGTCGGTTTCATTTGCAGCTTCGTCGGCGTTACGTGCTGGAACCCCCAGGAGAATCGGGTCCTTAATCTGGAGCTCCGGGATATGAAACTCTCGGGTCAGGTGCCAGAGTCGTTGATGTACTGTGGTAAAAGTCTCCAGAAACTGGATCTTGGGTCCAACGACGTTTCTGGTACGATCCCTTCTCAAATATGCAATTGGTTGCCATTTTTAGTAACACTGGACTTGTCCGATAATCATCTTTCTGGGCCCATACCTCCGGCTCTTGTGAATTGCACTTACTTGAATACCTTAATTCTTTCCAATAATCAACTTTCGGGTTCTATTCCTTATGAATTTGGGAGTTTGACTCGGCTTAAGGCGTTTTCTGTTGCTAATAATCATCTCAGTGGTATGATTCCTTCGTATTTAAGTGATTTTGACAAGGAAGACTTTGCTGGGAATAGTGGGCTTTGTGGGGGTCCCCTTGGATCTAAGTGTGGTGGGTTGAGTAAGAAGAATCTTGCTATAATTATCGCTGCTGGGGTTTTTGGTGCGGCTGCTTCTTTATTATTGGCAATTGGGATATGGTGGTGGTATCATTTGCGATTGGCTAGGAAGAAGAGAGGATATGGGGTTGGAAAGGATGATGATTGGGCTGTGAGGTTGAGGGGTCACAGACTTGCTCAAGTTACATTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAGGAGATTTGATGGCGGCTACAAATAATTTCAATTCAAAAAATATTATTATGTCCACAAGAACAGGGACTACTTATAAAGCAGATCTTCTTGATGGTTCAACACTTGCTGTCAAGCGGCTTAACACCTGTAAGATTGGAGAAAAGCAATTTCGCATGGAGATGAACAGGCTAGGACAAATCAGGCACCCGAACTTGGCACCCCTTTTAGGTTTCTGTGTGGTAGAAGAGGAAAAACTTCTGGTATATAAGCACATGTTAAATGGAACTCTGTCTTCCTTGTTACATAAAGATGGTACATCGGAACTTGATTGGCCAATGAGGTTCAGGATAGGCTTCGGGGCAGCTAGGGGCCTTGCTTATTTGCATCATGGTTGCCATCCTCCAATAAGGCACCAAAACTTCTGTTCCAATGTGATAGTCGTTGATGAAGATTTTGATGCTCGATTAATGGACACTGGACTTGCTAGGCTTATGACTTCTGATTCTAATGGGAGCAGCTTTGTGAGTGGGGACTTGGGGGAACTTGGCTATGTAGCTCCGGAATATCCAAGTACACTTGTTGCTTCTCTAAAAGGAGATGTATATGGATTTGGGGTTGTGCTTTTAGAGTTGGTCACTGGCCGCAAACCTCTTGAAGTTGGCAATGGAGAGGAAGAGTTTAAGGGTAACTTAGTGGATTGGGTAAATTTGTTTTCTAGTTCTGGTCGAATTAAGGATTGCATTGATAAGGCCATATGTGGAAGAGGGCATGACGAAGAGATTTTGCAGTTTCTGAAAATTGCATGTAATTGTGTGGTTTCTCGCCCCAAGGACAGGTGGTCTATGTACCAGGTTTATCATTCCTTGAAGAGTTTGTCCAAAGACTACAGTTTCTCTGAATATGATGATGAGTTTCCATTGATTTTTAATAAGCCAGAGTCGGCATAG 1812 0.4387 MAKYSLDLRNCLLLLLWSSAGFWGFAASQAEDDVECLKGIKGSFSDPQGKLASWRFDNNTVGFICSFVGVTCWNPQENRVLNLELRDMKLSGQVPESLMYCGKSLQKLDLGSNDVSGTIPSQICNWLPFLVTLDLSDNHLSGPIPPALVNCTYLNTLILSNNQLSGSIPYEFGSLTRLKAFSVANNHLSGMIPSYLSDFDKEDFAGNSGLCGGPLGSKCGGLSKKNLAIIIAAGVFGAAASLLLAIGIWWWYHLRLARKKRGYGVGKDDDWAVRLRGHRLAQVTLFQKPLVKVKLGDLMAATNNFNSKNIIMSTRTGTTYKADLLDGSTLAVKRLNTCKIGEKQFRMEMNRLGQIRHPNLAPLLGFCVVEEEKLLVYKHMLNGTLSSLLHKDGTSELDWPMRFRIGFGAARGLAYLHHGCHPPIRHQNFCSNVIVVDEDFDARLMDTGLARLMTSDSNGSSFVSGDLGELGYVAPEYPSTLVASLKGDVYGFGVVLLELVTGRKPLEVGNGEEEFKGNLVDWVNLFSSSGRIKDCIDKAICGRGHDEEILQFLKIACNCVVSRPKDRWSMYQVYHSLKSLSKDYSFSEYDDEFPLIFNKPESA 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2000 603 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Dere02g2000 603 Gene3D Transferase(Phosphotransferase) domain 1 380 598 - -
Dere02g2000 603 SUPERFAMILY Protein kinase-like (PK-like) 284 577 IPR011009 -
Dere02g2000 603 Gene3D Phosphorylase Kinase; domain 1 266 379 - -
Dere02g2000 603 ProSiteProfiles Protein kinase domain profile. 305 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g2000 603 Pfam Protein tyrosine and serine/threonine kinase 326 507 IPR001245 GO:0004672|GO:0006468
Dere02g2000 603 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 599 - -
Dere02g2000 603 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 73 196 - -
Dere02g2000 603 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
Dere02g2000 603 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Dere02g2000 603 SUPERFAMILY L domain-like 30 202 - -
Dere02g2000 603 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2000 Dere-ChrDere02 20289653 20291464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2000 31 602 Receptor kinase-like Gene Family AT3G28450 66.609 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Dere02g2000 PK_Tyr_Ser-Thr 3.9e-25 CL0016