Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1985 ATGGCAGGTGGAACCGAAGCTTTCCCAGATTTGGGATCCCACTGCCATCACGTTGATTGCCATCAGCTCGATTTCCTCCCTTTCGCATGCGACGCTTGCTCCCAGGTCTTCTGTCTGGAACATAGGTCTTACAACTCCCACGATTGCCCCAAATCAGACCATAACAGCAGGAAGGTTGTCGTCTGCGAAACATGTTCCATGTCGATTGAAACCACCGGTCACAACGTAAACGACGAGAACGCTATCTTGGACAAGCATCACAAGTCTGGGAATTGTGACCCCAACAAGAGGAAAAAACCCACTTGTCCCGTAAGAAGGTGCAAGGAGGTCTTGACATTTTCTAATACTACTACTTGTAAAACCTGCCACCTTAAGGTGTGCCTCAAGCATCGGTTTCCCGCGGACCACGATTGTAAAGCACCAACCTCAGCTTCAACCGGAGCTTCTGTAATTGGGGGATGGAAGGATTGGTTCTTGGCTGCTCTGGGTTCAAGGAATGCACAACAATGTTCCAAAAGCGGAGGACGCAGCTCTACGTCTCCTCGTCGTACTCCATCTGTTGAGGCCTGCTGA 573 0.5026 MAGGTEAFPDLGSHCHHVDCHQLDFLPFACDACSQVFCLEHRSYNSHDCPKSDHNSRKVVVCETCSMSIETTGHNVNDENAILDKHHKSGNCDPNKRKKPTCPVRRCKEVLTFSNTTTCKTCHLKVCLKHRFPADHDCKAPTSASTGASVIGGWKDWFLAALGSRNAQQCSKSGGRSSTSPRRTPSVEAC 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1985 190 Gene3D - 2 69 IPR035896 -
Dere02g1985 190 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Dere02g1985 190 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Dere02g1985 190 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Dere02g1985 190 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Dere02g1985 190 SUPERFAMILY AN1-like Zinc finger 94 142 IPR035896 -
Dere02g1985 190 MobiDBLite consensus disorder prediction 169 190 - -
Dere02g1985 190 Gene3D - 77 150 IPR035896 -
Dere02g1985 190 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 176 - -
Dere02g1985 190 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Dere02g1985 190 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Dere02g1985 190 SUPERFAMILY AN1-like Zinc finger 6 52 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1985 Dere-ChrDere02 20076492 20077138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1985 2 170 C2H2 Transcription Factor Family AT3G28210 60.355 1.56e-73 218