Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1965 ATGTCAGAAGGCTATGCTATTGAGCTTTACTTCGATCCTGCGCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGACAGATCAGTACCCAACTCATAGAAATTGAGTCACGCCCACACATCACTCTTTTCTCAAGTCCATTGATTGATCCTCCGAAGCTTGAATCCATAGTCAAGAATATCGCAGCCAAATTAGAACCTTTGCCGCTGTCTTTCTCTTCTATTGGAAGCCTGCCAAATGACAACAATGTCCTTTTTCTTGCACCGACGCCCTCAATCTCGCTACTTCAGTTCCAATCGCAGTTGTGTGATGCAATGAAGAAAGAAGGCATCGAGATAGGCGAGGAATATCGCCCCGATTCCTGGATTCCGTATTGTTCGGTTGCGCACGAAGTACCAAAATCGAGGATGGCCGAGGCATTTTGTGTCTTGCGGGACTTGAAATTGCCAGTCACTGGGTATGCTATGGATATTGGCCTGGTGGAGTTCTCACCAGTTCGTGAGCTCTTCTCATTTGTGCTTGGCAACACTCTGGATGCATAA 552 0.4728 MSEGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPLIDPPKLESIVKNIAAKLEPLPLSFSSIGSLPNDNNVLFLAPTPSISLLQFQSQLCDAMKKEGIEIGEEYRPDSWIPYCSVAHEVPKSRMAEAFCVLRDLKLPVTGYAMDIGLVEFSPVRELFSFVLGNTLDA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1965 183 Pfam 2'-5' RNA ligase superfamily 41 157 - -
Dere02g1965 183 Gene3D Cyclic phosphodiesterase 5 178 - -
Dere02g1965 183 PANTHER - 1 181 - -
Dere02g1965 183 SUPERFAMILY LigT-like 4 151 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1965 Dere-ChrDere02 19507304 19507855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1965 1 183 Calmodulin-binding Proteins AT5G40190 74.317 2.13e-95 273