Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1958 ATGGCTATTAGGTACTGTTACAAGGATTTGCTGCCTTTTGTAGCGCTGGTGACTATGGAATGCATTAACGTTGGATTGAATACTCTGTTCAAAGCTGCAACCTTGGATGGCATGAGCTACCATGTTTTTGTCGTCTATGCTTATGCTGTTGCCGCCATAGTTCTCCTCCCAGCAACCTTTATTTCCAGAAGATCGCGGGTGCTTCCTCCGCTCAATTTCTCCATACTCTCTAGAATTGGTCTTCTGGGGTTCATAGGATGTTTATCTCAGATCGTGGGGTACACAGGCATCAGTTACAGTTCTCCCACACTATCGTCGGCCATAAGCAATCTCGTCCCAGCTTTCACTTTCTTGCTTGCCCTCATTTTCAGGATGGAGACGATTGCTGCAAAAAGCACAAGCAGCCTAGCTAAGATATTGGGTACCATAGTATCAATATCAGGTGCATTTGTAGTGACTCTCTACAAAGGACCTCCCATCATCATCATTCACGCACCTTCCCTTTCACTTCATCAACCACTTCACATTCTCAAATCAGTGGATTCAAGATGGGCCCTTGGTGGTCTTCTGCTCACTGCTGAGTATATACTGTTTCCACTATGGTACATTGTAGTGGTGCAAATCATGCAGGTGTACCCGGACGAACTAACTGTGCTATTCTTTTACAACCTATGTGTAAGCATCATGGCAGCAATTGTAGGTATATTTACAGAGCCAAATCCAAGTGCTTGGAAGATACAACGCAGTACAGCTTTGGCCTCCATTGTCTGCTCTGGAATTTTCGGGTCATTCTTGAACAATGCAATTCACACCTGGGCACTGCACTTAAAGGGGCCGGTCTATGTGTCAATGTTCAAGCCACTCTCAATTGCCATTGCTGTTGCCATGGGGGTTATGTTCCTCGGTGATTCTCTCCATCTTGGAAGTATTGTTGGAGCCACAATAATATCGATTGGATTTTATACTGTGATGTGGGGTAAAGCAACAGAAGAGATGGATAAAAATGATGGTAAAATGGAATCACTTACTGCGGAGAATGCTCCTCTCTTGCAAGGCTATGAAACTAAAAGAGCTAACGAGAAAATGCATGCTAATATATGA 1101 0.4405 MAIRYCYKDLLPFVALVTMECINVGLNTLFKAATLDGMSYHVFVVYAYAVAAIVLLPATFISRRSRVLPPLNFSILSRIGLLGFIGCLSQIVGYTGISYSSPTLSSAISNLVPAFTFLLALIFRMETIAAKSTSSLAKILGTIVSISGAFVVTLYKGPPIIIIHAPSLSLHQPLHILKSVDSRWALGGLLLTAEYILFPLWYIVVVQIMQVYPDELTVLFFYNLCVSIMAAIVGIFTEPNPSAWKIQRSTALASIVCSGIFGSFLNNAIHTWALHLKGPVYVSMFKPLSIAIAVAMGVMFLGDSLHLGSIVGATIISIGFYTVMWGKATEEMDKNDGKMESLTAENAPLLQGYETKRANEKMHANI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1958 366 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016020|GO:0022857
Dere02g1958 366 Pfam EamA-like transporter family 202 324 IPR000620 GO:0016020
Dere02g1958 366 Pfam EamA-like transporter family 23 153 IPR000620 GO:0016020
Dere02g1958 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Dere02g1958 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1958 Dere-ChrDere02 19400435 19402644 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1958 1 357 Nodulin-like Gene Family AT3G28050 59.459 1.31e-147 420