Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1956 ATGGAGAGGAAGTTTTGGGACAAGGAAGTGGTTCCATTTTGTGCGATGGTCGCAGTGGAATGCACCAACGTTGGTGTTAACATTCTGTTCAAAGCAGCCACTCTGAGAGGCTTGAGCTACTATGTCTACATCGTCTATTCTTTTGCTGTTTCCACTCTTGTTCTTCTTCTACCTCTGCCCTTCGTCTTCACCTGGTCAAGGGGGCTTCCTCCCTTCAAGCCGTCTCTGCTTTTCAGAATTTTCCTCCTCGGAGTTATTGGGTTTGTAGCTCAGCTTTGCGGATACAAAGCAATTGAGTACAGTTCACCTACTCTAGCTGCTGCTATCAGCAACCTAATCCCCGCTTTTACATTCATACTTGCTGTCTTCTTCAGGATGGAAAAAGCAGCAGTAAGAAGTTCAAGCACTCAGGCCAAAATCATAGGTTCAGCAGTATCAATAGCAGGTGCACTCGTAGTTGTTCTCTACAGAGGCTCCACACTCATACCGGCTTCTTCTGCATCAGAATCTCATCTAATGAATTCTCCACCGGACTCATTATCATCACAAAGGAAATGGGTTCTTGGTGGCTTCCTACTTGCTGTTGAGTTTCTTCTAGTCCCAATCTGGTACATTGTTCAGACCCATGTTATAAAAGAATATCCAGCGGAGCTTGTAGTGGTGTTTCTATACAATCTGTGTGGGACTCTAGTATCTGCACCAGTATGTTTGATAGCAGAAGCAGACCTGAGTGCTTGGAAGATAAAGCCTGATATAACATTGGTCTCCATTATATACTCAGGATTATTTTGCACGTGCATAAGCTGTCTGGTTCACACATGGGGTCTCCATCTGAAAGGGCCTGTGTATGTAACAATCTTCAAGCCCCTCTCTATCGCCATTGCTGCTGCTATGAGTGTCATTTTCCTTGGCGAAGCTCTGTATCTGGGGAGTGTTATTGGAGCAGTAATACTGTCGGCTGGGTTTTATGCTGTGATATGGGGGAAAGCAAAAGAAGAAGAAGAAGAATCGAAGGAGAAGAACTATGGCTTGGGTAGCTCGGGACCCCCATCCAATTGCAAGACTCCTTTGTTGCAGAGCTACAACGACGTTGAAGATGACAGAGAAAGAAATCAAATACAAGGACGCCTAGGTGTCTAA 1140 0.4509 MERKFWDKEVVPFCAMVAVECTNVGVNILFKAATLRGLSYYVYIVYSFAVSTLVLLLPLPFVFTWSRGLPPFKPSLLFRIFLLGVIGFVAQLCGYKAIEYSSPTLAAAISNLIPAFTFILAVFFRMEKAAVRSSSTQAKIIGSAVSIAGALVVVLYRGSTLIPASSASESHLMNSPPDSLSSQRKWVLGGFLLAVEFLLVPIWYIVQTHVIKEYPAELVVVFLYNLCGTLVSAPVCLIAEADLSAWKIKPDITLVSIIYSGLFCTCISCLVHTWGLHLKGPVYVTIFKPLSIAIAAAMSVIFLGEALYLGSVIGAVILSAGFYAVIWGKAKEEEEESKEKNYGLGSSGPPSNCKTPLLQSYNDVEDDRERNQIQGRLGV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1956 379 Pfam EamA-like transporter family 197 326 IPR000620 GO:0016020
Dere02g1956 379 Pfam EamA-like transporter family 24 154 IPR000620 GO:0016020
Dere02g1956 379 MobiDBLite consensus disorder prediction 338 379 - -
Dere02g1956 379 PANTHER WAT1-RELATED PROTEIN 11 337 IPR030184 GO:0016020|GO:0022857
Dere02g1956 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Dere02g1956 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 331 - -
Dere02g1956 379 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1956 Dere-ChrDere02 19379272 19381124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1956 4 333 Nodulin-like Gene Family AT5G40240 60.000 9.87e-139 398