Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1930 ATGCTCTCTCTGCAATTCACCGCCACCGGTGCTGTCGGTCGTCCTTCGCGACTACTGCCGAGCAGCAATTCTTCGTCGTTTTGGGCCAGAGATCGGTGCTTGCTCAAAGCAAGTTCTTCAATTGCTGGTAGAGAGAAGCTTCGAATCAATGGTGGAACTATTAGGGTTTTGGCAATATCTGGAAATTCTCCCGCATTCAAGATGAATCTGAACGAGTATCTGGTCACTCTGGAGAGACCACTTGGTATCCGGTTCGCTCTCACAGCTAACGGCAAAATCATCGTTCACTCCCTTAAGAAAGGGGGTCATGCAGAGAGGTCGAGAATCGTTATGGTCGGTGACACTTTGAAGAAAGCTGGCGGTTCATCGCAAAATAGGCTTGTCGAGATAAAAAACTTTGGAGATGCACAGAATGTTCTAAAGGAGCAAACAAGTTCTTTTAGCTTGGTTCTTGAAAGGCCCAAATCTCCTTTTCCCATTCAACTACTGCATGGGATAAATGATTCTGAAATACTATTTAATAGAGGTCAAGTTCCTATTGCCACCTGGGACAAGACACTGTTGGCATCAAATTTACAGCCGTCTATTGATAGCTCTGGGAATTGTGGGTTTTCTATCTTCAACTCAAAGTTTCTAACATCAAAAGGAAGCAAGTTGTTGGGCAATCCAAATGAACATGCCATCCTCCATGAGGAGATAAAACTATTTAGTGACGAAGAGTATGAAGAAGGAGAGTGGGCTCATGGAAGTTTCCCACTTGAGGAATATATTAAAGCTCTGGATCGTTCAAAAGGCGAGATGTACTATGATCACTCCCTTGGTATGCGCTATACTAAGATTTCAGAGCAAATATATGTGGGATCCTGTATACAAAAAGAAGCTGATGTTGAAACCTTGTCAAAAGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTCCAGCTGAATCTGAGAATTGGGGAATCGATTTCAAATCCATTAATGAATCATGTCAAAGGAATAATGTACTCATGATCAACTATTCTATACGGGAGGGAGATTCTTATGATATGAGGAAGAAATTACCATTTTGTGTGGGGCTTTTCTTACGGTTGCTGAGGAAAAACCATCGTGTTTATGTTACGTGCACTTCTGGATTTGATCGGTCTCCTGCTTGTGTGATTGCATACCTGCATTGGATGACGGATCTTTCCCTCCATGCAGCTTATACTTGGGTCACTGGAATGTACACATGCAGGCCTGACAGGCCGGCAATTGCATGGGCAACATGGGATCTTATAGCTATGGTTGAAAAGGGTAACCATGATGGACCTCCTACACATGCTGTCACATTCGTATGGAATGAGAGTGAGGGACAAGATGTCACTTTGGTGGGAGATTTTACTGGAAATTGGAAAGAACCAATCAAGGCAATACACAAGGGTGGAGTAAGATACGAAGCAGAAGTTAAACTTCCACAAGGAAAGTACTACTATAAGTTTATTGTTAATGGACAATGGAGGCACTCAACTGCTTCACCAGCAGAAAGGGATGAAAGGGGAAATGTTAACAATGTAATTGTGATTGGTGATATTGCTAGCGTTAGGCCTTCTGTCAAACACCAGCAGAAAGATGCCAACGTTGTCAAGGTGATCGAGAGGCCTTTGGATGAAAAAGAGCGATTTAAGCTGGCAAAAGCAGCTCGCTGTATTGCTTTCTATGTCTGTCCCATTACATTAGCTCCCAAGTCCCAGCTACGTGTCAAATCGGCATTGCTTGTTTGCATGTCTTTTAATCTCCAACATTCAAACCTCATCTTCAAGGATAGAATGAAGAAACTCTTATTTGCTAGGCTTTCGTTTTCATTATCTGTGTCTGGTCGCTTAAGAATGGAGAGACTTCATGAGAGCCATGCACGACTATGA 1905 0.4294 MLSLQFTATGAVGRPSRLLPSSNSSSFWARDRCLLKASSSIAGREKLRINGGTIRVLAISGNSPAFKMNLNEYLVTLERPLGIRFALTANGKIIVHSLKKGGHAERSRIVMVGDTLKKAGGSSQNRLVEIKNFGDAQNVLKEQTSSFSLVLERPKSPFPIQLLHGINDSEILFNRGQVPIATWDKTLLASNLQPSIDSSGNCGFSIFNSKFLTSKGSKLLGNPNEHAILHEEIKLFSDEEYEEGEWAHGSFPLEEYIKALDRSKGEMYYDHSLGMRYTKISEQIYVGSCIQKEADVETLSKVEGVTAVLNFQSPAESENWGIDFKSINESCQRNNVLMINYSIREGDSYDMRKKLPFCVGLFLRLLRKNHRVYVTCTSGFDRSPACVIAYLHWMTDLSLHAAYTWVTGMYTCRPDRPAIAWATWDLIAMVEKGNHDGPPTHAVTFVWNESEGQDVTLVGDFTGNWKEPIKAIHKGGVRYEAEVKLPQGKYYYKFIVNGQWRHSTASPAERDERGNVNNVIVIGDIASVRPSVKHQQKDANVVKVIERPLDEKERFKLAKAARCIAFYVCPITLAPKSQLRVKSALLVCMSFNLQHSNLIFKDRMKKLLFARLSFSLSVSGRLRMERLHESHARL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1930 634 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 23 574 - -
Dere02g1930 634 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 268 408 IPR029021 -
Dere02g1930 634 Gene3D Immunoglobulins 430 526 IPR013783 -
Dere02g1930 634 CDD E_set_AMPKbeta_like_N 443 522 - -
Dere02g1930 634 Gene3D Protein tyrosine phosphatase superfamily 269 536 IPR029021 -
Dere02g1930 634 CDD DSP_laforin-like 275 421 IPR045204 GO:0019203
Dere02g1930 634 SUPERFAMILY E set domains 440 523 IPR014756 -
Dere02g1930 634 SUPERFAMILY PDZ domain-like 79 168 IPR036034 GO:0005515
Dere02g1930 634 ProSiteProfiles PDZ domain profile. 74 155 IPR001478 GO:0005515
Dere02g1930 634 Pfam Glycogen recognition site of AMP-activated protein kinase 443 523 IPR032640 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1930 139 577 Protein tyrosine phosphatase (PTP) family AT3G01510 65.556 0.0 616