Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1929 ATGCACCCATTTTTGGGTAATGGGCTTGGTCTGGTTTTTTACTATGCTCTCGTATTGTCCTTTTCTACGAGGATTAATGCGGGAGGATTAGGTGAAAAGCTGGATTTAGAGGAGAAAAGAAGAGAACCCATTTTAAAAATGCCTGATCGAACGAAAAGGAGGATACATTTTAGCAAACTATATTCATTTTCGTGCATAAAATCTTCCTTCAGACATGATCAGCCTCAAATAGGGCAGAGAGGGTACTCAAGGGTCGTCTACTGCAACGACCCTGATAACCCAGAAGCTGTTCAGTTGAATTACAGAGGCAATTATGTTTCAACGACCAAGTATACGGCTTTTAATTTTATTCCCAAGTCTTTATTTGAGCAGTTTAGGAGGGTTGCAAATATTTACTTTCTTATCGTCGCGTGTCTTTCGTTTAGTCCATTGGCACCTTTTACAGCTTTAAGTATTGTTGCACCGTTGCTGGTGGTCATAGGAGCTACTATGGCCAAGGAAGCTGTGGAGGATTGGAGGAGGAGAAAACAGGATATAGAGGCCAACAACCGAAAGGTTCTTGTGTACAGTAAAAATTATAGATTTGTGGAAAGCAGATGGAAGAAACTCCACGTTGGTGATCTCATTAAAGTGCATAAGGATGAATACTTCCCTGCTGATCTTCTTCTGCTTTCATCAAGTTATGAGGATGGGGTTTGCTATGTTGACACAATGAATCTTGATGGAGAAACCAATCTAAAACTAAAGCATGCTTTGGAAGTGACGGCACAGCTTCATGATGAAAAATCCCTTCAAAAGTTTAGGGCAGTGATCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTGTTGGAACTTTGCACTATGAGAGTAAAGAATATCCGCTTTCCTTGCAGCAGATTCTTTTAAGAGATTCTAAGCTAAAAAACACTGAATATGTCTATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACTGACCCACCATCCAAAAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATCTACATCCTATTCAGCACCTTGATTTTGATATCCTTTATTGGCTCAGTCTATTTTGGCATCGAGACTAAAAGGGATATTAGTGCTGGCAAGTACAGAAGATGGTATCTTCGTCCAGACAATTCAACAGTGTTTTATGATCCTAGAAGGGCTACACTTGCTGCAATTCTTCATTTTTTAACCGCTCTTATGTTGTATGGATATCTAATTCCCATATCACTATATGTCTCCATAGAAATTGTGAAAGTTTTGCAGAGTATTTTTATCAACCAAGATCAGGGAATGTATTATGAAGAAACTGATAGGCCAGCACATGCACGCACATCGAATTTAAATGAGGAACTTGGTCAGGTTGATACTATATTGTCTGACAAAACAGGTACTTTGACATGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCAGGCACTCCGTATGGTCGTGGTATGACAGAAGTAGAGAGGGCACTTGCACGGAGGGAAGGTGATGGTTTATCATCTGATTTACAGGGCCAGAATAGTGATGCAGTGGATACCAGACAGCCAATTAAGGGTTTCAACTTCAGAGATGAACGTCTAATGAAAGGGAAATGGGTTAACGAACCTCATTCAGACATCATACAGAAATTCTTTCGAGTTTTAGCAATTTGTCATACAGCTATTCCTGATGTAGATGAAGAATCTGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAACTTGGTTTTGAGTTTTTTGCAAGGACACAAACAAGCATATCATTGCATGAATTAGACTATAACAGTGGAAAAAAGGTTGACAGAGTGTACGAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATTGTTAGGAATGAAGAAAATCAAATATTGCTCCTATGCAAGGGTGCAGACAGTGTTATGTTCGAAAGGCTCTCCAAAGATGGAAGACAATTTGAGGCTGAGACCATAGATCATATCAAAAGATATGCTGAGGCAGGTTTAAGAACACTGGTAATCACATACCGTGAACTTGGTGAAGAAGAATATAGGTTGTGGGAAGAGGTGTTCCTAAAAGCCAAAACTTCTGTAGCTGCAGACCATGATGAGTTGGTGGATGCAGCTGCTGATAAGATGGAAAGAGATTTAACTCTTCTTGGTGCAACAGCAGTTGAGGACAGACTACAGAAGGGGGTTCCTGAATGTATTGATAAGCTTGCCCAGGCAGGAATAAAATTATGGGTATTAACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTTTGCTTGTAGTTTACTTAGGCAGGACATGAAACAGATACTGATAACTCTTGATTCACCAGATATCCTATCATTGGAAAAACAAGGGGATAAGGAGGCTCTAGCCAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATCAGAGAGGGAATCTCACAAATCAAGGCAGTAAGAGAGAGTTCTAAAGAAAGTTCTACTGAATTCAGCTTGATAATTGATGGGAAGTCCCTGGATTATTCTCTTAACAAGAATATGGAGAAGTCATTTTTTGAGCTGGCAATCAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAGAAAGCTCTCGTTACAAGATTAGTGAAATTGGGAACAGGGAAGACAACACTATCAATTGGTGATGGAGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGTATTAGTGGTGCAGAAGGGATGCAGGCTGTAATGGCGAGTGATTTTGCCATAGCTCAATTTCATTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGACGAATTGCAATGATGATATGCTATTTTTTCTATAAGAACATCGCATTTGGATTCACTCTATTTTGGTTTGAGGCGTATGCTTCGTTCTCAGGTCAACCAGCATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCTGTAATTGCTCTGGGTGTTTTTGATCAGGATGTTTCTGCCCGACTTTGCCTCAAGTATCCTTTTCTATATCTAGAGGGAATAGAGGACATCCTCTTCAGCTGGCCCCGGATTCTTGGGTGGATGTTTAACGGAGTCATTGGTTCTTTGATCATCTTCTTCTTGACCATAAACTCCGTCTTAAATCAGGCCTTCAGAAGAGATGGTCAGGTGGTTGATTTGGAAGTACTAGGAGTCACAATGTACACTTGTGTGGTGTGGACTGTAAATTGCCAGATAGCACTATCCATTAACTACTTCACTTGGATCCAACATTTCTTCATATGGGGCAGCATTGCCCTCTGGTACGTGTTCTTGCTGGTTTATGGTTATCTGTCTCCAGCCATATCCACAACAGCCTACAAGGTTCTTGTGGAAGCCTGCGTCCCCAGTGTTCTCTATTGGCTAGTTACTCTTCTAGTTGTTGTGTGTGCTCTTCTTCCCTATTTCTCCTATAGGGCTTTCCAGACTCGGTTTCGACCAATGTACCATGATATTATTCAGAAAAAACATGTAGAAGGGTCTGAAACTGAGATAGGTGAAGAGTTGCCTAATAGTGAAGAAGAACAAGGTGTGGATTCATTGGTGAGTCCAAGCTTCAGCAGCTACACCTCCGACAAACTCGCAGATATCGCTGATAAAGTTAACCGAGAATACTTTCGCGGCCTAGAGCCACGCGATAATGGTTTCGAATTCGTCACGTTTCGAAAGGCTGCCGATGGTGTTTTCTTCGACGGCTATGTGGGTCCGGTTTTCCCGGTCTTCAATCGGGACCTGTTGACGTTGCATGAGAGTGATGGTGGAGATGGCCATGGTCGGGATTCTAGTGCAGAGGAGGATGAGATGGCTCTTCAATTCCCGATGAGGAAGTTGTTGATTCGCGACGATAATCGGCCCCGCGATCTTGATCTTCCGTGCTCCTCGTCGTCGTCGTCGGAGATGGATGATTTGGAGGAAATTCCGCCGGGAACTTACTGCGTTTGGACTCCTAATTCGGCCAAAGCTTCGCCGAGCAGACACAAGAAGAGCAACTCTGGAGGATCGCCGTCGGCTTCGAAACGGTGGAAGCTTCTGGATTTGTTGCTGCCGAGCAACAGCGACGGGAAGGACACGTTTGTGTTTCTAACTCCGTCATCTTCGGGTTCGAATTTGGCGAAGAAGAAGGAGGTGAAACGGGAGAATTCGAAAGAGCAGTGGAGCTCCACGAAACAGAAGAAGGTCTCAGCGCACGAAGCTCTCTACATGATGAATAGAGACTTGAGGAAAGTGGATAAGCGAAGGTCTTATTTACCGTACAGGCAAGACTTGATCGGGTTTTCATTCTGA 4407 0.4236 MHPFLGNGLGLVFYYALVLSFSTRINAGGLGEKLDLEEKRREPILKMPDRTKRRIHFSKLYSFSCIKSSFRHDQPQIGQRGYSRVVYCNDPDNPEAVQLNYRGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTALSIVAPLLVVIGATMAKEAVEDWRRRKQDIEANNRKVLVYSKNYRFVESRWKKLHVGDLIKVHKDEYFPADLLLLSSSYEDGVCYVDTMNLDGETNLKLKHALEVTAQLHDEKSLQKFRAVIKCEDPNENLYSFVGTLHYESKEYPLSLQQILLRDSKLKNTEYVYAVVIFTGHDTKVMQNATDPPSKRSKIERKMDKIIYILFSTLILISFIGSVYFGIETKRDISAGKYRRWYLRPDNSTVFYDPRRATLAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQGMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGRGMTEVERALARREGDGLSSDLQGQNSDAVDTRQPIKGFNFRDERLMKGKWVNEPHSDIIQKFFRVLAICHTAIPDVDEESGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELDYNSGKKVDRVYELLHVLEFSSSRKRMSVIVRNEENQILLLCKGADSVMFERLSKDGRQFEAETIDHIKRYAEAGLRTLVITYRELGEEEYRLWEEVFLKAKTSVAADHDELVDAAADKMERDLTLLGATAVEDRLQKGVPECIDKLAQAGIKLWVLTGDKMETAVNIGFACSLLRQDMKQILITLDSPDILSLEKQGDKEALAKASLESIKKQIREGISQIKAVRESSKESSTEFSLIIDGKSLDYSLNKNMEKSFFELAINCASVICCRSSPKQKALVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAIAQFHFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKYPFLYLEGIEDILFSWPRILGWMFNGVIGSLIIFFLTINSVLNQAFRRDGQVVDLEVLGVTMYTCVVWTVNCQIALSINYFTWIQHFFIWGSIALWYVFLLVYGYLSPAISTTAYKVLVEACVPSVLYWLVTLLVVVCALLPYFSYRAFQTRFRPMYHDIIQKKHVEGSETEIGEELPNSEEEQGVDSLVSPSFSSYTSDKLADIADKVNREYFRGLEPRDNGFEFVTFRKAADGVFFDGYVGPVFPVFNRDLLTLHESDGGDGHGRDSSAEEDEMALQFPMRKLLIRDDNRPRDLDLPCSSSSSSEMDDLEEIPPGTYCVWTPNSAKASPSRHKKSNSGGSPSASKRWKLLDLLLPSNSDGKDTFVFLTPSSSGSNLAKKKEVKRENSKEQWSSTKQKKVSAHEALYMMNRDLRKVDKRRSYLPYRQDLIGFSF 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1929 1468 Pfam Phospholipid-translocating ATPase N-terminal 86 149 IPR032631 -
Dere02g1929 1468 Coils Coil 162 182 - -
Dere02g1929 1468 MobiDBLite consensus disorder prediction 1358 1378 - -
Dere02g1929 1468 FunFam Phospholipid-transporting ATPase 584 742 - -
Dere02g1929 1468 FunFam Phospholipid-transporting ATPase 741 950 - -
Dere02g1929 1468 CDD P-type_ATPase_APLT_Dnf-like 103 1070 - -
Dere02g1929 1468 Gene3D - 587 742 IPR023299 GO:0000166
Dere02g1929 1468 PRINTS P-type cation-transporting ATPase superfamily signature 470 484 - -
Dere02g1929 1468 PRINTS P-type cation-transporting ATPase superfamily signature 910 929 - -
Dere02g1929 1468 PRINTS P-type cation-transporting ATPase superfamily signature 236 250 - -
Dere02g1929 1468 SFLD Haloacid Dehalogenase 452 961 - -
Dere02g1929 1468 Pfam Phospholipid-translocating P-type ATPase C-terminal 938 1188 IPR032630 -
Dere02g1929 1468 SUPERFAMILY Calcium ATPase, transduction domain A 190 331 IPR008250 -
Dere02g1929 1468 MobiDBLite consensus disorder prediction 1358 1379 - -
Dere02g1929 1468 Gene3D - 157 333 - -
Dere02g1929 1468 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 477 744 IPR023299 GO:0000166
Dere02g1929 1468 ProSitePatterns E1-E2 ATPases phosphorylation site. 472 478 IPR018303 -
Dere02g1929 1468 NCBIfam HAD-IC family P-type ATPase 878 992 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere02g1929 1468 Gene3D - 743 950 IPR023214 -
Dere02g1929 1468 NCBIfam phospholipid-translocating P-type ATPase 101 1196 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Dere02g1929 1468 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 1188 IPR023298 -
Dere02g1929 1468 MobiDBLite consensus disorder prediction 1408 1431 - -
Dere02g1929 1468 SUPERFAMILY HAD-like 465 965 IPR036412 -
Dere02g1929 1468 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 76 1200 - -
Dere02g1929 1468 Pfam Protein of unknown function (DUF1645) 1266 1458 IPR012442 -
Dere02g1929 1468 SFLD p-type atpase 452 961 IPR044492 -
Dere02g1929 1468 FunFam Phospholipid-transporting ATPase 162 332 - -
Dere02g1929 1468 MobiDBLite consensus disorder prediction 1412 1431 - -
Dere02g1929 1468 Pfam Cation transport ATPase (P-type) 582 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1929 Dere-ChrDere02 19069374 19080333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1929 55 1201 Primary Pumps ATPases AT1G68710 65.055 0.0 1621