Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1927 ATGGAGCATGTATCAGAAAAAAAGTTTCCCCTCAATGCAAAAGATTATAAGCTATATGAAGAAGTTGGGGAAGGTGTTAGCGCCACTGTGTACAGGGCTCTCTGTATTCCACTCAACGAGATAGTTGCAATCAAGGTTCTTGATCTGGAAAAGTGCAATAATGATCTGGATGGCATTCGGAGAGAGGTGCAGACAATGAACTTAATAAATCACCCTAATCTTTTACAGTCACATTGCTCTTTCACTACTGGACACAATCTTTGGGTTGTGATGCCATACATGTCTGGTGGATCCTGCCTGCATATAATGAAATCTTCCTATCCTGAGGGTTTTGAAGAACCTGTTATTGCTACTTTGCTGCGAGAGGTTCTCAAAGCTCTAGTCTATCTTCATGCCCATGGACACATACATAGAGATGTTAAGGCTGGGAATATTTTGATTGATTCTAGTGGTGCAGTCAAATTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGATCAAGAAACACTTTTGTTGGAACTCCGTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACACGGATATGATTTTAAAGCAGACATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGCCATGCCCCATTTTCAAAGTACCCTCCAATGAAAGTTTTGCTTATGACGTTACAAAATGCCCCTCCTGGTCTTGATTATGAAAGAGACAAGAGATTTTCGAAGTCTTTCAAAGAGTTGGTTGCCACCTGCTTAGTAAAGGACCCTAAGAAACGTCCAAGTTCAGAAAAGCTTTTAAAGCATCACTTCTTTAAACATGCTCGCCCTAGAGAGTATCTATCTCACAGCATTTTAGATGGCCTTGCTCTGCTAGGGGATCGTTTTAGGATGCTGAAGGCAAAAGAGGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGAACAATTATCACAGAAAGAATACATCCGTGGAATTAGTGCTTGGAATTTCAACCTAGAAGATTTAAAGAGTCAGGCTGCTCTTATTCAAGACGATGGCATGCCAAATGCAGAAGAGCTAGATATGGGTAGGAAGCAAAAGGATAAATCTGATGACGTGAGGATTCCTGCAGAGGGGCTATCTTCTGTAGCAGCTAATCATTCAGATGCTGCACCCGTACCGGAGAAGGAGGGTGGGTTGAATGATCTTCAAGATTTGGAGAGTTCACTTGCTTCATTCCCTATTAAACCAATTCGAGCACTTAAAGATTGTTTCGATGTCTGTGAGGATAGTATTGACAATACTACTTTGAGAGATTCAGATCAGGATGATGGAAGAAATGAGAATGACATTTCTGGGAAAAGCAGTTCATTGCCACAAAATGCTATATCTGAGCATGAGCATAAGAAGTTGAGTGATTCTCTGCTGCCTGATAATTCTTTTTCTGCTAAAAAATTTATCATTGATGGGGACAGGGATTATCTGCAGCAAAAATATTACTCTGAGCGGAATAGTGGTCCATTGTCATATTGGCAGAAGAGAGACACCAACAACCTCTTATCTGTTGATGATGCATCAGAAGCAGTTGTCCAACGCAAAGGGCGATTCAAAATCATGCCAGCAGATCTCAGTCCCAAGGGTAATTTGAACTACACTTCTGGTCCCATGTGCGGAGGTCCTTCCGTTCCACCATATCAGAACCTTACGTCTGCCTCTATTCTTTCATCACTGCTGTGCATTTTGCAGCATAACAGCTTGCAAAGGGAAGAAATTATTAAATTAATGAAGTATGCAGAGCAATCTTGTGGCAGGAGTATAGAATCGGTGGACGCAGGGATAATTGATCTTTTGCAGGTGCCACCTGCAACAACTAGGGAGAGAGAGCTGCATTCTGAGGTGATCCAACTCCAAAACAGCATTGAGGGCCTTGCTGAGGAATTACAAAGACAAAAGATGAAAAATTCCCAGTTAGAGAAACAGTTGAACTTTGCGGTCAACAGAGTGGAAAAGTAA 2019 0.4175 MEHVSEKKFPLNAKDYKLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMNLINHPNLLQSHCSFTTGHNLWVVMPYMSGGSCLHIMKSSYPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSSGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARPREYLSHSILDGLALLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDGMPNAEELDMGRKQKDKSDDVRIPAEGLSSVAANHSDAAPVPEKEGGLNDLQDLESSLASFPIKPIRALKDCFDVCEDSIDNTTLRDSDQDDGRNENDISGKSSSLPQNAISEHEHKKLSDSLLPDNSFSAKKFIIDGDRDYLQQKYYSERNSGPLSYWQKRDTNNLLSVDDASEAVVQRKGRFKIMPADLSPKGNLNYTSGPMCGGPSVPPYQNLTSASILSSLLCILQHNSLQREEIIKLMKYAEQSCGRSIESVDAGIIDLLQVPPATTRERELHSEVIQLQNSIEGLAEELQRQKMKNSQLEKQLNFAVNRVEK 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1927 672 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Dere02g1927 672 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1927 672 MobiDBLite consensus disorder prediction 436 476 - -
Dere02g1927 672 Coils Coil 628 669 - -
Dere02g1927 672 MobiDBLite consensus disorder prediction 436 452 - -
Dere02g1927 672 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1927 672 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Dere02g1927 672 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Dere02g1927 672 Gene3D Transferase(Phosphotransferase) domain 1 97 293 - -
Dere02g1927 672 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Dere02g1927 672 MobiDBLite consensus disorder prediction 383 403 - -
Dere02g1927 672 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 653 IPR047173 GO:0043539
Dere02g1927 672 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1927 672 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Dere02g1927 672 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1927 Dere-ChrDere02 18961407 18976073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1927 1 669 MAP Kinase Kinase Kinase Kinase AT5G14720 66.084 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Dere02g1927 Pkinase 1.5e-59 CL0016